RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
SUPT5H-220ENST00000601978 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
SUPT5H-220ENST00000601978 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
SUPT5H-220ENST00000601978 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
SUPT5H-220ENST00000601978 C7orf43Q8WVR3 580 aa17.97■□□□□ 0.47
SUPT5H-220ENST00000601978 PCNTO95613 3336 aa17.97■□□□□ 0.47
SUPT5H-220ENST00000601978 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
SUPT5H-220ENST00000601978 NPHP1O15259 732 aa17.96■□□□□ 0.47
SUPT5H-220ENST00000601978 KCNQ3O43525 872 aa17.96■□□□□ 0.47
SUPT5H-220ENST00000601978 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
SUPT5H-220ENST00000601978 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
SUPT5H-220ENST00000601978 KLRG2A4D1S0 409 aaPredicted RBP17.95■□□□□ 0.46
SUPT5H-220ENST00000601978 RGL2O15211 777 aa17.95■□□□□ 0.46
SUPT5H-220ENST00000601978 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
SUPT5H-220ENST00000601978 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
SUPT5H-220ENST00000601978 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
SUPT5H-220ENST00000601978 CAPN15O75808 1086 aa17.94■□□□□ 0.46
SUPT5H-220ENST00000601978 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
SUPT5H-220ENST00000601978 ARFGEF2Q9Y6D5 1785 aa17.94■□□□□ 0.46
SUPT5H-220ENST00000601978 POTEIP0CG38 1075 aa17.93■□□□□ 0.46
SUPT5H-220ENST00000601978 POTEJP0CG39 1038 aa17.93■□□□□ 0.46
SUPT5H-220ENST00000601978 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
SUPT5H-220ENST00000601978 ZNF652Q9Y2D9 606 aa17.93■□□□□ 0.46
SUPT5H-220ENST00000601978 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
SUPT5H-220ENST00000601978 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
SUPT5H-220ENST00000601978 NPR1P16066 1061 aa17.92■□□□□ 0.46
SUPT5H-220ENST00000601978 PRKAR2BP31323 418 aa17.92■□□□□ 0.46
SUPT5H-220ENST00000601978 CCDC93Q567U6 631 aa17.92■□□□□ 0.46
SUPT5H-220ENST00000601978 LDHDQ86WU2 507 aa17.92■□□□□ 0.46
SUPT5H-220ENST00000601978 TAF1DQ9H5J8 278 aaPredicted RBP17.91■□□□□ 0.46
SUPT5H-220ENST00000601978 PASKQ96RG2 1323 aa17.91■□□□□ 0.46
SUPT5H-220ENST00000601978 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 SCN4AP35499 1836 aa17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 CNTNAP1P78357 1384 aa17.9■□□□□ 0.46
SUPT5H-220ENST00000601978 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
SUPT5H-220ENST00000601978 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
SUPT5H-220ENST00000601978 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
SUPT5H-220ENST00000601978 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
SUPT5H-220ENST00000601978 CACNA1SQ13698 1873 aa17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 ITGBL1O95965 494 aaPredicted RBP17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
SUPT5H-220ENST00000601978 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
SUPT5H-220ENST00000601978 TMEM88BA6NKF7 163 aa17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 ALDH1B1P30837 517 aa17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 MCM10Q7L590 875 aa17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
SUPT5H-220ENST00000601978 FZD9O00144 591 aa17.85■□□□□ 0.45
SUPT5H-220ENST00000601978 FOXN1O15353 648 aa17.85■□□□□ 0.45
SUPT5H-220ENST00000601978 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
SUPT5H-220ENST00000601978 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
SUPT5H-220ENST00000601978 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
SUPT5H-220ENST00000601978 EPHX2P34913 555 aa17.84■□□□□ 0.45
SUPT5H-220ENST00000601978 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
SUPT5H-220ENST00000601978 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 VEGFBP49765 207 aa17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 EAPPQ56P03 285 aaPredicted RBP17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 SYNE4Q8N205 404 aa17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 PSMD1Q99460 953 aa17.83■□□□□ 0.44
SUPT5H-220ENST00000601978 SNED1Q8TER0 1413 aa17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 ADAMTSL1Q8N6G6 1762 aa17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 HLFQ16534 295 aa17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
SUPT5H-220ENST00000601978 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
SUPT5H-220ENST00000601978 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
SUPT5H-220ENST00000601978 GPC2Q8N158 579 aa17.81■□□□□ 0.44
SUPT5H-220ENST00000601978 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
SUPT5H-220ENST00000601978 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
SUPT5H-220ENST00000601978 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 AIDAQ96BJ3 306 aa17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
SUPT5H-220ENST00000601978 FAM177BA6PVY3 158 aa17.79■□□□□ 0.44
SUPT5H-220ENST00000601978 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
SUPT5H-220ENST00000601978 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
SUPT5H-220ENST00000601978 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
SUPT5H-220ENST00000601978 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
SUPT5H-220ENST00000601978 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
SUPT5H-220ENST00000601978 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
SUPT5H-220ENST00000601978 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
SUPT5H-220ENST00000601978 MAP1SQ66K74 1059 aaPredicted RBP17.77■□□□□ 0.44
SUPT5H-220ENST00000601978 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
SUPT5H-220ENST00000601978 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
SUPT5H-220ENST00000601978 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
SUPT5H-220ENST00000601978 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms