RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
NEAT1-203ENST00000601801 POTECB2RU33 542 aa18.91■□□□□ 0.62
NEAT1-203ENST00000601801 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
NEAT1-203ENST00000601801 SETDB2Q96T68 719 aa18.91■□□□□ 0.62
NEAT1-203ENST00000601801 ANKRD31Q8N7Z5 1873 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 NFKBIEO00221 500 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 NPHP1O15259 732 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 PDE6BP35913 854 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
NEAT1-203ENST00000601801 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
NEAT1-203ENST00000601801 BCORQ6W2J9 1755 aa18.89■□□□□ 0.61
NEAT1-203ENST00000601801 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.61
NEAT1-203ENST00000601801 PRR5LQ6MZQ0 368 aa18.89■□□□□ 0.61
NEAT1-203ENST00000601801 CNBD1Q8NA66 436 aa18.88■□□□□ 0.61
NEAT1-203ENST00000601801 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
NEAT1-203ENST00000601801 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
NEAT1-203ENST00000601801 PNISRQ8TF01 805 aaKnown RBP18.87■□□□□ 0.61
NEAT1-203ENST00000601801 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.61
NEAT1-203ENST00000601801 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
NEAT1-203ENST00000601801 MAPK8IP3Q9UPT6 1336 aa18.87■□□□□ 0.61
NEAT1-203ENST00000601801 ZNF652Q9Y2D9 606 aa18.87■□□□□ 0.61
NEAT1-203ENST00000601801 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
NEAT1-203ENST00000601801 ST5P78524 1137 aa18.86■□□□□ 0.61
NEAT1-203ENST00000601801 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
NEAT1-203ENST00000601801 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
NEAT1-203ENST00000601801 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
NEAT1-203ENST00000601801 RALBP1Q15311 655 aa18.85■□□□□ 0.61
NEAT1-203ENST00000601801 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
NEAT1-203ENST00000601801 NBPF26B4DH59 902 aa18.84■□□□□ 0.61
NEAT1-203ENST00000601801 NBPF10Q6P3W6 841 aaKnown RBP18.84■□□□□ 0.61
NEAT1-203ENST00000601801 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
NEAT1-203ENST00000601801 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
NEAT1-203ENST00000601801 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
NEAT1-203ENST00000601801 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.61
NEAT1-203ENST00000601801 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.6
NEAT1-203ENST00000601801 RGL2O15211 777 aa18.82■□□□□ 0.6
NEAT1-203ENST00000601801 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
NEAT1-203ENST00000601801 ARFGEF2Q9Y6D5 1785 aa18.82■□□□□ 0.6
NEAT1-203ENST00000601801 C21orf2O43822 256 aa18.81■□□□□ 0.6
NEAT1-203ENST00000601801 ERFEQ4G0M1 354 aa18.81■□□□□ 0.6
NEAT1-203ENST00000601801 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
NEAT1-203ENST00000601801 CNKSR1Q969H4 720 aa18.81■□□□□ 0.6
NEAT1-203ENST00000601801 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
NEAT1-203ENST00000601801 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
NEAT1-203ENST00000601801 MKRN1Q9UHC7 482 aaKnown RBP18.81■□□□□ 0.6
NEAT1-203ENST00000601801 LTBP3Q9NS15 1303 aa18.8■□□□□ 0.6
NEAT1-203ENST00000601801 SRGNP10124 158 aa18.8■□□□□ 0.6
NEAT1-203ENST00000601801 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
NEAT1-203ENST00000601801 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
NEAT1-203ENST00000601801 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
NEAT1-203ENST00000601801 MASTLQ96GX5 879 aa18.8■□□□□ 0.6
NEAT1-203ENST00000601801 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
NEAT1-203ENST00000601801 SCN4AP35499 1836 aa18.79■□□□□ 0.6
NEAT1-203ENST00000601801 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
NEAT1-203ENST00000601801 POTEIP0CG38 1075 aa18.78■□□□□ 0.6
NEAT1-203ENST00000601801 POTEJP0CG39 1038 aa18.78■□□□□ 0.6
NEAT1-203ENST00000601801 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
NEAT1-203ENST00000601801 CNTNAP1P78357 1384 aa18.78■□□□□ 0.6
NEAT1-203ENST00000601801 FOXN1O15353 648 aa18.77■□□□□ 0.6
NEAT1-203ENST00000601801 RIPK4P57078 832 aa18.77■□□□□ 0.6
NEAT1-203ENST00000601801 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
NEAT1-203ENST00000601801 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
NEAT1-203ENST00000601801 RRP7AQ9Y3A4 280 aaKnown RBP18.77■□□□□ 0.6
NEAT1-203ENST00000601801 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
NEAT1-203ENST00000601801 FAM177BA6PVY3 158 aa18.76■□□□□ 0.59
NEAT1-203ENST00000601801 DDNO94850 711 aaPredicted RBP18.76■□□□□ 0.59
NEAT1-203ENST00000601801 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
NEAT1-203ENST00000601801 HLFQ16534 295 aa18.76■□□□□ 0.59
NEAT1-203ENST00000601801 TAOK3Q9H2K8 898 aa18.76■□□□□ 0.59
NEAT1-203ENST00000601801 PRDM10Q9NQV6 1147 aa18.76■□□□□ 0.59
NEAT1-203ENST00000601801 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
NEAT1-203ENST00000601801 NPR1P16066 1061 aa18.75■□□□□ 0.59
NEAT1-203ENST00000601801 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
NEAT1-203ENST00000601801 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
NEAT1-203ENST00000601801 TSPYL4Q9UJ04 414 aa18.75■□□□□ 0.59
NEAT1-203ENST00000601801 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
NEAT1-203ENST00000601801 MYL6BP14649 208 aa18.74■□□□□ 0.59
NEAT1-203ENST00000601801 NUP98P52948 1817 aa18.74■□□□□ 0.59
NEAT1-203ENST00000601801 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
NEAT1-203ENST00000601801 KLRG2A4D1S0 409 aaPredicted RBP18.73■□□□□ 0.59
NEAT1-203ENST00000601801 TMPOP42166 694 aaKnown RBP18.73■□□□□ 0.59
NEAT1-203ENST00000601801 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
NEAT1-203ENST00000601801 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
NEAT1-203ENST00000601801 IQCA1LA6NCM1 817 aa18.72■□□□□ 0.59
NEAT1-203ENST00000601801 TTLL7Q6ZT98 887 aa18.72■□□□□ 0.59
NEAT1-203ENST00000601801 LDHDQ86WU2 507 aa18.72■□□□□ 0.59
NEAT1-203ENST00000601801 L3MBTL3Q96JM7 780 aaPredicted RBP18.72■□□□□ 0.59
NEAT1-203ENST00000601801 BABAM1Q9NWV8 329 aa18.72■□□□□ 0.59
NEAT1-203ENST00000601801 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
NEAT1-203ENST00000601801 CTCFP49711 727 aaPredicted RBP18.71■□□□□ 0.59
NEAT1-203ENST00000601801 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
NEAT1-203ENST00000601801 ALDH1B1P30837 517 aa18.7■□□□□ 0.58
NEAT1-203ENST00000601801 VEGFBP49765 207 aa18.7■□□□□ 0.58
NEAT1-203ENST00000601801 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
NEAT1-203ENST00000601801 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
NEAT1-203ENST00000601801 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
NEAT1-203ENST00000601801 TAF1DQ9H5J8 278 aaPredicted RBP18.7■□□□□ 0.58
NEAT1-203ENST00000601801 TMEM88BA6NKF7 163 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms