RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 MAP3K15Q6ZN16 1313 aa25.96■■□□□ 1.75
SSBP4-210ENST00000601444 SERPINB2P05120 415 aa25.96■■□□□ 1.75
SSBP4-210ENST00000601444 AIMP1Q12904 312 aaKnown RBP25.96■■□□□ 1.75
SSBP4-210ENST00000601444 KIF6Q6ZMV9 814 aa25.96■■□□□ 1.75
SSBP4-210ENST00000601444 COPS6Q7L5N1 327 aa25.96■■□□□ 1.75
SSBP4-210ENST00000601444 XAGE3Q8WTP9 111 aa25.96■■□□□ 1.75
SSBP4-210ENST00000601444 CLEC4GQ6UXB4 293 aa25.95■■□□□ 1.74
SSBP4-210ENST00000601444 DBF4Q9UBU7 674 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-210ENST00000601444 EXOSC9Q06265 439 aaKnown RBP25.94■■□□□ 1.74
SSBP4-210ENST00000601444 GOLGA2Q08379 1002 aa25.94■■□□□ 1.74
SSBP4-210ENST00000601444 TWISTNBQ3B726 338 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-210ENST00000601444 SETDB2Q96T68 719 aa25.94■■□□□ 1.74
SSBP4-210ENST00000601444 C10orf71Q711Q0 1435 aa25.94■■□□□ 1.74
SSBP4-210ENST00000601444 ERVV-1B6SEH8 477 aa25.93■■□□□ 1.74
SSBP4-210ENST00000601444 TCERG1O14776 1098 aaKnown RBP25.93■■□□□ 1.74
SSBP4-210ENST00000601444 ZNF652Q9Y2D9 606 aa25.93■■□□□ 1.74
SSBP4-210ENST00000601444 CCDC24Q8N4L8 307 aa25.92■■□□□ 1.74
SSBP4-210ENST00000601444 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
SSBP4-210ENST00000601444 CDCA7LQ96GN5 454 aa25.91■■□□□ 1.74
SSBP4-210ENST00000601444 NIP7Q9Y221 180 aaKnown RBP eCLIP25.91■■□□□ 1.74
SSBP4-210ENST00000601444 RGL2O15211 777 aa25.9■■□□□ 1.74
SSBP4-210ENST00000601444 PHAXQ9H814 394 aaKnown RBP25.9■■□□□ 1.74
SSBP4-210ENST00000601444 HYPKQ9NX55 129 aa25.9■■□□□ 1.74
SSBP4-210ENST00000601444 WWC3Q9ULE0 1092 aa25.9■■□□□ 1.74
SSBP4-210ENST00000601444 CARMIL3Q8ND23 1372 aa25.9■■□□□ 1.74
SSBP4-210ENST00000601444 AFDNP55196 1824 aaKnown RBP25.89■■□□□ 1.74
SSBP4-210ENST00000601444 A0A0G2JLW4 131 aa25.89■■□□□ 1.74
SSBP4-210ENST00000601444 VAMP4O75379 141 aa25.89■■□□□ 1.74
SSBP4-210ENST00000601444 CCDC30Q5VVM6 783 aa25.89■■□□□ 1.74
SSBP4-210ENST00000601444 NRXN2Q9P2S2 1712 aa25.88■■□□□ 1.73
SSBP4-210ENST00000601444 FAM177BA6PVY3 158 aa25.88■■□□□ 1.73
SSBP4-210ENST00000601444 PRR5LQ6MZQ0 368 aa25.88■■□□□ 1.73
SSBP4-210ENST00000601444 GIGYF2Q6Y7W6 1299 aaKnown RBP25.88■■□□□ 1.73
SSBP4-210ENST00000601444 PXDNLA1KZ92 1463 aa25.87■■□□□ 1.73
SSBP4-210ENST00000601444 KIF13BQ9NQT8 1826 aa25.87■■□□□ 1.73
SSBP4-210ENST00000601444 GPTP24298 496 aa25.87■■□□□ 1.73
SSBP4-210ENST00000601444 SLFN5Q08AF3 891 aa25.87■■□□□ 1.73
SSBP4-210ENST00000601444 DPEP1P16444 411 aa25.86■■□□□ 1.73
SSBP4-210ENST00000601444 TGFB2P61812 414 aa25.86■■□□□ 1.73
SSBP4-210ENST00000601444 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
SSBP4-210ENST00000601444 E9PSI1 815 aa25.85■■□□□ 1.73
SSBP4-210ENST00000601444 ZNF34Q8IZ26 560 aa25.85■■□□□ 1.73
SSBP4-210ENST00000601444 KIAA1551Q9HCM1 1747 aa25.85■■□□□ 1.73
SSBP4-210ENST00000601444 UBN2Q6ZU65 1347 aa25.85■■□□□ 1.73
SSBP4-210ENST00000601444 GOLGB1Q14789 3259 aaKnown RBP25.84■■□□□ 1.73
SSBP4-210ENST00000601444 NUP98P52948 1817 aa25.84■■□□□ 1.73
SSBP4-210ENST00000601444 KCNA3P22001 575 aa25.84■■□□□ 1.73
SSBP4-210ENST00000601444 CHRNA5P30532 468 aa25.84■■□□□ 1.73
SSBP4-210ENST00000601444 ANKRD13DQ6ZTN6 518 aa25.84■■□□□ 1.73
SSBP4-210ENST00000601444 NBPF5PQ86XG9 351 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-210ENST00000601444 ATP10DQ9P241 1426 aa25.84■■□□□ 1.73
SSBP4-210ENST00000601444 N4BP2Q86UW6 1770 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-210ENST00000601444 YBX3P16989 372 aaKnown RBP eCLIP25.83■■□□□ 1.733e-6■■□□□ 12.9
SSBP4-210ENST00000601444 GPR162Q16538 588 aa25.83■■□□□ 1.73
SSBP4-210ENST00000601444 CNBD1Q8NA66 436 aa25.83■■□□□ 1.73
SSBP4-210ENST00000601444 PLBD2Q8NHP8 589 aa25.83■■□□□ 1.73
SSBP4-210ENST00000601444 SLC4A2P04920 1241 aa25.82■■□□□ 1.72
SSBP4-210ENST00000601444 HNRNPUQ00839 825 aaKnown RBP eCLIP25.82■■□□□ 1.72
SSBP4-210ENST00000601444 SUSD4Q5VX71 490 aa25.82■■□□□ 1.72
SSBP4-210ENST00000601444 G2E3Q7L622 706 aa25.82■■□□□ 1.72
SSBP4-210ENST00000601444 STK31Q9BXU1 1019 aa25.82■■□□□ 1.72
SSBP4-210ENST00000601444 CHMP4AQ9BY43 222 aa25.82■■□□□ 1.72
SSBP4-210ENST00000601444 NPHP1O15259 732 aa25.81■■□□□ 1.72
SSBP4-210ENST00000601444 ZNF428Q96B54 188 aa25.81■■□□□ 1.72
SSBP4-210ENST00000601444 TCIRG1Q13488 830 aa25.8■■□□□ 1.72
SSBP4-210ENST00000601444 TPTE2Q6XPS3 522 aa25.8■■□□□ 1.72
SSBP4-210ENST00000601444 TRMT2AQ8IZ69 625 aaKnown RBP25.8■■□□□ 1.72
SSBP4-210ENST00000601444 DCAF8L1A6NGE4 600 aa25.79■■□□□ 1.72
SSBP4-210ENST00000601444 NUTM1Q86Y26 1132 aa25.79■■□□□ 1.72
SSBP4-210ENST00000601444 BRIP1Q9BX63 1249 aa25.79■■□□□ 1.72
SSBP4-210ENST00000601444 UTRNP46939 3433 aa25.79■■□□□ 1.72
SSBP4-210ENST00000601444 ST5P78524 1137 aa25.78■■□□□ 1.72
SSBP4-210ENST00000601444 RIC3Q7Z5B4 369 aa25.78■■□□□ 1.72
SSBP4-210ENST00000601444 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
SSBP4-210ENST00000601444 C2CD5Q86YS7 1000 aa25.77■■□□□ 1.72
SSBP4-210ENST00000601444 ATP5J2-PTCD1G3V325 749 aa25.76■■□□□ 1.71
SSBP4-210ENST00000601444 ERFEQ4G0M1 354 aa25.76■■□□□ 1.71
SSBP4-210ENST00000601444 NLRP10Q86W26 655 aa25.76■■□□□ 1.71
SSBP4-210ENST00000601444 ANKRD31Q8N7Z5 1873 aa25.76■■□□□ 1.71
SSBP4-210ENST00000601444 NTSR2O95665 410 aa25.75■■□□□ 1.71
SSBP4-210ENST00000601444 GTF2E1P29083 439 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-210ENST00000601444 PDE6BP35913 854 aa25.75■■□□□ 1.71
SSBP4-210ENST00000601444 PARP10Q53GL7 1025 aa25.75■■□□□ 1.71
SSBP4-210ENST00000601444 NYXQ9GZU5 481 aa25.75■■□□□ 1.71
SSBP4-210ENST00000601444 ABCC12Q96J65 1359 aa25.74■■□□□ 1.71
SSBP4-210ENST00000601444 H0YIN7 160 aa25.74■■□□□ 1.71
SSBP4-210ENST00000601444 ISCA1Q9BUE6 129 aa25.74■■□□□ 1.71
SSBP4-210ENST00000601444 PIM2Q9P1W9 311 aa25.74■■□□□ 1.71
SSBP4-210ENST00000601444 BCS1LQ9Y276 419 aa25.74■■□□□ 1.71
SSBP4-210ENST00000601444 PI4KAP2A4QPH2 592 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 PPP1R42Q7Z4L9 355 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 SYNE4Q8N205 404 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 PI4KAP1Q8N8J0 262 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 MYD88Q99836 296 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 UTP14AQ9BVJ6 771 aaKnown RBP25.73■■□□□ 1.71
SSBP4-210ENST00000601444 MAP3K2Q9Y2U5 619 aa25.73■■□□□ 1.71
SSBP4-210ENST00000601444 ARFGEF2Q9Y6D5 1785 aa25.72■■□□□ 1.71
SSBP4-210ENST00000601444 ADCY9O60503 1353 aa25.72■■□□□ 1.71
SSBP4-210ENST00000601444 DDX58O95786 925 aaKnown RBP25.72■■□□□ 1.71
SSBP4-210ENST00000601444 FLIIQ13045 1269 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms