RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
SNRNP70-209ENST00000601065 PLBD2Q8NHP8 589 aa27.94■■■□□ 2.06
SNRNP70-209ENST00000601065 ARFGEF2Q9Y6D5 1785 aa27.93■■■□□ 2.06
SNRNP70-209ENST00000601065 NUP188Q5SRE5 1749 aa27.92■■■□□ 2.06
SNRNP70-209ENST00000601065 CCT4P50991 539 aaKnown RBP27.92■■■□□ 2.06
SNRNP70-209ENST00000601065 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
SNRNP70-209ENST00000601065 DDX19BQ9UMR2 479 aa27.92■■■□□ 2.06
SNRNP70-209ENST00000601065 ATP10DQ9P241 1426 aa27.91■■■□□ 2.06
SNRNP70-209ENST00000601065 HMGB2P26583 209 aaKnown RBP27.9■■■□□ 2.06
SNRNP70-209ENST00000601065 KIF6Q6ZMV9 814 aa27.9■■■□□ 2.06
SNRNP70-209ENST00000601065 COL15A1P39059 1388 aa27.9■■■□□ 2.06
SNRNP70-209ENST00000601065 GNPATO15228 680 aa27.89■■■□□ 2.06
SNRNP70-209ENST00000601065 RPS6KA4O75676 772 aa27.89■■■□□ 2.06
SNRNP70-209ENST00000601065 SF3B2Q13435 895 aaKnown RBP27.89■■■□□ 2.06
SNRNP70-209ENST00000601065 BEND3Q5T5X7 828 aa27.89■■■□□ 2.06
SNRNP70-209ENST00000601065 ZBTB3Q9H5J0 574 aa27.89■■■□□ 2.06
SNRNP70-209ENST00000601065 DZIP3Q86Y13 1208 aaKnown RBP27.88■■■□□ 2.05
SNRNP70-209ENST00000601065 METTL22Q9BUU2 404 aaPredicted RBP27.88■■■□□ 2.05
SNRNP70-209ENST00000601065 ARXQ96QS3 562 aa27.88■■■□□ 2.05
SNRNP70-209ENST00000601065 CAMKK2Q96RR4 588 aa27.88■■■□□ 2.05
SNRNP70-209ENST00000601065 MAP3K15Q6ZN16 1313 aa27.88■■■□□ 2.05
SNRNP70-209ENST00000601065 EN1Q05925 392 aaPredicted RBP27.87■■■□□ 2.05
SNRNP70-209ENST00000601065 AK7Q96M32 723 aa27.87■■■□□ 2.05
SNRNP70-209ENST00000601065 SRCIN1Q9C0H9 1055 aa27.87■■■□□ 2.05
SNRNP70-209ENST00000601065 ZBTB7BO15156 539 aaPredicted RBP27.86■■■□□ 2.05
SNRNP70-209ENST00000601065 TBC1D2BQ9UPU7 963 aa27.86■■■□□ 2.05
SNRNP70-209ENST00000601065 RTCBQ9Y3I0 505 aaKnown RBP27.86■■■□□ 2.05
SNRNP70-209ENST00000601065 BAG6P46379 1132 aa27.86■■■□□ 2.05
SNRNP70-209ENST00000601065 B4GALNT3Q6L9W6 998 aa27.86■■■□□ 2.05
SNRNP70-209ENST00000601065 NEXNQ0ZGT2 675 aa27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 EZH2Q15910 746 aaKnown RBP27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 AMIGO3Q86WK7 504 aa27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 CCDC125Q86Z20 511 aa27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 LINS1Q8NG48 757 aa27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 MYD88Q99836 296 aa27.85■■■□□ 2.05
SNRNP70-209ENST00000601065 UBR3Q6ZT12 1888 aa27.84■■■□□ 2.05
SNRNP70-209ENST00000601065 A0A087WZG4 1122 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 ERVV-1B6SEH8 477 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 IGKV5-2P06315 115 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 AAMPQ13685 434 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 CWF19L2Q2TBE0 894 aaKnown RBP27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 SMIM5Q71RC9 77 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 ZBTB40Q9NUA8 1239 aa27.83■■■□□ 2.05
SNRNP70-209ENST00000601065 ALDH1L1O75891 902 aa27.82■■■□□ 2.04
SNRNP70-209ENST00000601065 GIGYF2Q6Y7W6 1299 aaKnown RBP27.82■■■□□ 2.04
SNRNP70-209ENST00000601065 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
SNRNP70-209ENST00000601065 CHMP4BQ9H444 224 aaKnown RBP27.82■■■□□ 2.04
SNRNP70-209ENST00000601065 HLFQ16534 295 aa27.81■■■□□ 2.04
SNRNP70-209ENST00000601065 DEFB132Q7Z7B7 95 aa27.81■■■□□ 2.04
SNRNP70-209ENST00000601065 NUP98P52948 1817 aa27.81■■■□□ 2.04
SNRNP70-209ENST00000601065 CAMTA2O94983 1202 aa27.81■■■□□ 2.04
SNRNP70-209ENST00000601065 BCORQ6W2J9 1755 aa27.81■■■□□ 2.04
SNRNP70-209ENST00000601065 NEURL1BA8MQ27 555 aa27.8■■■□□ 2.04
SNRNP70-209ENST00000601065 MEIS3Q99687 375 aa27.8■■■□□ 2.04
SNRNP70-209ENST00000601065 AFDNP55196 1824 aaKnown RBP27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 ATP5J2-PTCD1G3V325 749 aa27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 TCIRG1Q13488 830 aa27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 AKT1S1Q96B36 256 aa27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 C4AP0C0L4 1744 aa27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 IBTKQ9P2D0 1353 aaPredicted RBP27.79■■■□□ 2.04
SNRNP70-209ENST00000601065 ADRA2BP18089 450 aa27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 ZNF827Q17R98 1081 aa27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 TRAPPC3LQ5T215 181 aa27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 ARHGEF1Q92888 912 aaKnown RBP27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 USP44Q9H0E7 712 aa27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 PHF14O94880 888 aa27.78■■■□□ 2.04
SNRNP70-209ENST00000601065 ANKRD36CQ5JPF3 1778 aa27.77■■■□□ 2.04
SNRNP70-209ENST00000601065 SCN7AQ01118 1682 aa27.77■■■□□ 2.04
SNRNP70-209ENST00000601065 SSFA2P28290 1259 aa27.77■■■□□ 2.04
SNRNP70-209ENST00000601065 HSP90AB3PQ58FF7 597 aa27.77■■■□□ 2.04
SNRNP70-209ENST00000601065 NARFQ9UHQ1 456 aa27.77■■■□□ 2.04
SNRNP70-209ENST00000601065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.76■■■□□ 2.03
SNRNP70-209ENST00000601065 ISCA1Q9BUE6 129 aa27.76■■■□□ 2.03
SNRNP70-209ENST00000601065 GCKRQ14397 625 aa27.76■■■□□ 2.03
SNRNP70-209ENST00000601065 RGL2O15211 777 aa27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 GNAI3P08754 354 aa27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 TRIM28Q13263 835 aaKnown RBP27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 CCDC191Q8NCU4 936 aa27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 TUBGCP6Q96RT7 1819 aa27.74■■■□□ 2.03
SNRNP70-209ENST00000601065 RFC4P35249 363 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 CLEC4GQ6UXB4 293 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 ZNF652Q9Y2D9 606 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 ZPR1O75312 459 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 NBPF7P0C2Y1 421 aaPredicted RBP27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 USPL1Q5W0Q7 1092 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 C1orf115Q9H7X2 142 aa27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 C9orf78Q9NZ63 289 aaPredicted RBP27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 SRP68Q9UHB9 627 aaKnown RBP27.73■■■□□ 2.03
SNRNP70-209ENST00000601065 USP42Q9H9J4 1324 aaKnown RBP27.72■■■□□ 2.03
SNRNP70-209ENST00000601065 GRM8O00222 908 aa27.72■■■□□ 2.03
SNRNP70-209ENST00000601065 CWC25Q9NXE8 425 aaPredicted RBP27.72■■■□□ 2.03
SNRNP70-209ENST00000601065 UTYO14607 1347 aa27.72■■■□□ 2.03
SNRNP70-209ENST00000601065 UBTFL1P0CB47 393 aaPredicted RBP27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 ZNF34Q8IZ26 560 aa27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 BCL2L12Q9HB09 334 aa27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 PCDHB15Q9Y5E8 787 aa27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 GPTP24298 496 aa27.71■■■□□ 2.03
SNRNP70-209ENST00000601065 ANO8Q9HCE9 1232 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms