RNA–Protein interactions for RNA: ENST00000597147.1

COLGALT1-204, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS ALT2 TSL 5

Gene COLGALT1, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-204ENST00000597147 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.52
COLGALT1-204ENST00000597147 NFKBIEO00221 500 aa18.26■□□□□ 0.51
COLGALT1-204ENST00000597147 KCNQ3O43525 872 aa18.26■□□□□ 0.51
COLGALT1-204ENST00000597147 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
COLGALT1-204ENST00000597147 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 PDE6BP35913 854 aa18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 IL6STP40189 918 aaPredicted RBP18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 RIPK4P57078 832 aa18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.511e-8■■■□□ 18.5
COLGALT1-204ENST00000597147 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
COLGALT1-204ENST00000597147 SLX4Q8IY92 1834 aa18.24■□□□□ 0.51
COLGALT1-204ENST00000597147 BRIP1Q9BX63 1249 aa18.24■□□□□ 0.51
COLGALT1-204ENST00000597147 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
COLGALT1-204ENST00000597147 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
COLGALT1-204ENST00000597147 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
COLGALT1-204ENST00000597147 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
COLGALT1-204ENST00000597147 NPHP1O15259 732 aa18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
COLGALT1-204ENST00000597147 C21orf2O43822 256 aa18.21■□□□□ 0.51
COLGALT1-204ENST00000597147 A1BGP04217 495 aa18.21■□□□□ 0.51
COLGALT1-204ENST00000597147 CNBD1Q8NA66 436 aa18.21■□□□□ 0.51
COLGALT1-204ENST00000597147 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
COLGALT1-204ENST00000597147 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
COLGALT1-204ENST00000597147 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
COLGALT1-204ENST00000597147 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
COLGALT1-204ENST00000597147 CAMTA2O94983 1202 aa18.19■□□□□ 0.5
COLGALT1-204ENST00000597147 ST5P78524 1137 aa18.19■□□□□ 0.5
COLGALT1-204ENST00000597147 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
COLGALT1-204ENST00000597147 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
COLGALT1-204ENST00000597147 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
COLGALT1-204ENST00000597147 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
COLGALT1-204ENST00000597147 LTBP3Q9NS15 1303 aa18.18■□□□□ 0.5
COLGALT1-204ENST00000597147 STYK1Q6J9G0 422 aa18.17■□□□□ 0.5
COLGALT1-204ENST00000597147 CNKSR1Q969H4 720 aa18.17■□□□□ 0.5
COLGALT1-204ENST00000597147 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
COLGALT1-204ENST00000597147 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
COLGALT1-204ENST00000597147 LAMB4A4D0S4 1761 aa18.17■□□□□ 0.5
COLGALT1-204ENST00000597147 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 POTECB2RU33 542 aa18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 EIF4A1P60842 406 aaKnown RBP18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 SCN4AP35499 1836 aa18.16■□□□□ 0.5
COLGALT1-204ENST00000597147 SRGNP10124 158 aa18.15■□□□□ 0.5
COLGALT1-204ENST00000597147 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
COLGALT1-204ENST00000597147 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
COLGALT1-204ENST00000597147 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
COLGALT1-204ENST00000597147 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
COLGALT1-204ENST00000597147 MASTLQ96GX5 879 aa18.14■□□□□ 0.49
COLGALT1-204ENST00000597147 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
COLGALT1-204ENST00000597147 CLEC4GQ6UXB4 293 aa18.13■□□□□ 0.49
COLGALT1-204ENST00000597147 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
COLGALT1-204ENST00000597147 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
COLGALT1-204ENST00000597147 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
COLGALT1-204ENST00000597147 NUP98P52948 1817 aa18.11■□□□□ 0.49
COLGALT1-204ENST00000597147 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 CHL1O00533 1208 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 APAF1O14727 1248 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 HSPA1AP0DMV8 641 aaKnown RBP18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 HSPA1BP0DMV9 641 aaKnown RBP18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 TNS4Q8IZW8 715 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
COLGALT1-204ENST00000597147 NPR1P16066 1061 aa18.09■□□□□ 0.49
COLGALT1-204ENST00000597147 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
COLGALT1-204ENST00000597147 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
COLGALT1-204ENST00000597147 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
COLGALT1-204ENST00000597147 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
COLGALT1-204ENST00000597147 TPTE2Q6XPS3 522 aa18.08■□□□□ 0.48
COLGALT1-204ENST00000597147 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
COLGALT1-204ENST00000597147 NIP7Q9Y221 180 aaKnown RBP eCLIP18.08■□□□□ 0.48
COLGALT1-204ENST00000597147 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 RGL2O15211 777 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 CAPN15O75808 1086 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 POTEJP0CG39 1038 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
COLGALT1-204ENST00000597147 KLRG2A4D1S0 409 aaPredicted RBP18.06■□□□□ 0.48
COLGALT1-204ENST00000597147 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
COLGALT1-204ENST00000597147 FKBP4Q02790 459 aaKnown RBP eCLIP18.06■□□□□ 0.48
COLGALT1-204ENST00000597147 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
COLGALT1-204ENST00000597147 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
COLGALT1-204ENST00000597147 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
COLGALT1-204ENST00000597147 L3MBTL3Q96JM7 780 aaPredicted RBP18.05■□□□□ 0.48
COLGALT1-204ENST00000597147 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
COLGALT1-204ENST00000597147 ERVV-1B6SEH8 477 aa18.04■□□□□ 0.48
COLGALT1-204ENST00000597147 MYL6BP14649 208 aa18.04■□□□□ 0.48
COLGALT1-204ENST00000597147 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
COLGALT1-204ENST00000597147 LDHDQ86WU2 507 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms