RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 COL24A1Q17RW2 1714 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 CASZ1Q86V15 1759 aa8.64□□□□□ -1.03
AC003973.2-201ENST00000596778 E9PSI1 815 aa8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 RPS6KA4O75676 772 aa8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 TRMT2AQ8IZ69 625 aaKnown RBP8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 MYH16Q9H6N6 1097 aa8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
AC003973.2-201ENST00000596778 KCNQ3O43525 872 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 CRKLP46109 303 aaKnown RBP8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 GOLGA2Q08379 1002 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 INTS5Q6P9B9 1019 aaKnown RBP8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 CCDC87Q9NVE4 849 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 MYH14Q7Z406 1995 aaKnown RBP8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 ZBED9Q6R2W3 1325 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 TUBGCP6Q96RT7 1819 aa8.62□□□□□ -1.03
AC003973.2-201ENST00000596778 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 ZNF428Q96B54 188 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 AK7Q96M32 723 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 RTCBQ9Y3I0 505 aaKnown RBP8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 PNPLA7Q6ZV29 1317 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 FANCIQ9NVI1 1328 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 A0A087WZG4 1122 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 SLFN5Q08AF3 891 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 MIS18AQ9NYP9 233 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 TFCP2L1Q9NZI6 479 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 USP16Q9Y5T5 823 aa8.61□□□□□ -1.03
AC003973.2-201ENST00000596778 GNPATO15228 680 aa8.6□□□□□ -1.03
AC003973.2-201ENST00000596778 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
AC003973.2-201ENST00000596778 LRP10Q7Z4F1 713 aa8.6□□□□□ -1.03
AC003973.2-201ENST00000596778 LRP5O75197 1615 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 COL15A1P39059 1388 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 C4AP0C0L4 1744 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 KCNQ4P56696 695 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 CLEC4GQ6UXB4 293 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 DBF4Q9UBU7 674 aaPredicted RBP8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 ZBTB1Q9Y2K1 713 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 SSUH2Q9Y2M2 353 aa8.59□□□□□ -1.03
AC003973.2-201ENST00000596778 CACNA1FO60840 1977 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 SCN7AQ01118 1682 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 ERVV-1B6SEH8 477 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 R3HDM1Q15032 1099 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 PDIA6Q15084 440 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 HYPKQ9NX55 129 aa8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
AC003973.2-201ENST00000596778 BCORQ6W2J9 1755 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 PRAMEF22A3QJZ6 481 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 VAMP4O75379 141 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 TWISTNBQ3B726 338 aaPredicted RBP8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 HDGFL1Q5TGJ6 251 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 AMIGO3Q86WK7 504 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 NLGN1Q8N2Q7 840 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 C8orf58Q8NAV2 365 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
AC003973.2-201ENST00000596778 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
AC003973.2-201ENST00000596778 A1BGP04217 495 aa8.56□□□□□ -1.04
AC003973.2-201ENST00000596778 RFC4P35249 363 aa8.56□□□□□ -1.04
AC003973.2-201ENST00000596778 ATP10DQ9P241 1426 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 ST18O60284 1047 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 CAMTA2O94983 1202 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 GYS1P13807 737 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 EXOSC9Q06265 439 aaKnown RBP8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 KRT24Q2M2I5 525 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 ALDH1L2Q3SY69 923 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 TSPYL6Q8N831 410 aa8.55□□□□□ -1.04
AC003973.2-201ENST00000596778 ZPR1O75312 459 aa8.54□□□□□ -1.04
AC003973.2-201ENST00000596778 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
AC003973.2-201ENST00000596778 PTGER2P43116 358 aa8.54□□□□□ -1.04
AC003973.2-201ENST00000596778 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
AC003973.2-201ENST00000596778 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 563.1 ms