RNA–Protein interactions for RNA: ENST00000596554.5

C19orf48-206, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 727 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-206ENST00000596554 CNKSR1Q969H4 720 aa17.4■□□□□ 0.38
C19orf48-206ENST00000596554 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
C19orf48-206ENST00000596554 RGL2O15211 777 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 ST5P78524 1137 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
C19orf48-206ENST00000596554 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
C19orf48-206ENST00000596554 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
C19orf48-206ENST00000596554 SOGA3Q5TF21 947 aa17.38■□□□□ 0.37
C19orf48-206ENST00000596554 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
C19orf48-206ENST00000596554 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
C19orf48-206ENST00000596554 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
C19orf48-206ENST00000596554 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
C19orf48-206ENST00000596554 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
C19orf48-206ENST00000596554 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
C19orf48-206ENST00000596554 SCN4AP35499 1836 aa17.36■□□□□ 0.37
C19orf48-206ENST00000596554 NPHP1O15259 732 aa17.36■□□□□ 0.37
C19orf48-206ENST00000596554 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
C19orf48-206ENST00000596554 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
C19orf48-206ENST00000596554 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
C19orf48-206ENST00000596554 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
C19orf48-206ENST00000596554 MCM10Q7L590 875 aa17.36■□□□□ 0.37
C19orf48-206ENST00000596554 C7orf43Q8WVR3 580 aa17.36■□□□□ 0.37
C19orf48-206ENST00000596554 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
C19orf48-206ENST00000596554 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
C19orf48-206ENST00000596554 KLRG2A4D1S0 409 aaPredicted RBP17.35■□□□□ 0.37
C19orf48-206ENST00000596554 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
C19orf48-206ENST00000596554 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
C19orf48-206ENST00000596554 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
C19orf48-206ENST00000596554 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
C19orf48-206ENST00000596554 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
C19orf48-206ENST00000596554 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
C19orf48-206ENST00000596554 NPR1P16066 1061 aa17.33■□□□□ 0.36
C19orf48-206ENST00000596554 NUP98P52948 1817 aa17.33■□□□□ 0.36
C19orf48-206ENST00000596554 DCTN1Q14203 1278 aa17.32■□□□□ 0.36
C19orf48-206ENST00000596554 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
C19orf48-206ENST00000596554 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
C19orf48-206ENST00000596554 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
C19orf48-206ENST00000596554 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
C19orf48-206ENST00000596554 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
C19orf48-206ENST00000596554 L3MBTL3Q96JM7 780 aaPredicted RBP17.31■□□□□ 0.36
C19orf48-206ENST00000596554 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
C19orf48-206ENST00000596554 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
C19orf48-206ENST00000596554 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
C19orf48-206ENST00000596554 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
C19orf48-206ENST00000596554 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
C19orf48-206ENST00000596554 HSPA1AP0DMV8 641 aaKnown RBP17.28■□□□□ 0.36
C19orf48-206ENST00000596554 HSPA1BP0DMV9 641 aaKnown RBP17.28■□□□□ 0.36
C19orf48-206ENST00000596554 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
C19orf48-206ENST00000596554 HLFQ16534 295 aa17.28■□□□□ 0.36
C19orf48-206ENST00000596554 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
C19orf48-206ENST00000596554 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
C19orf48-206ENST00000596554 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
C19orf48-206ENST00000596554 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
C19orf48-206ENST00000596554 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
C19orf48-206ENST00000596554 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
C19orf48-206ENST00000596554 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
C19orf48-206ENST00000596554 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
C19orf48-206ENST00000596554 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
C19orf48-206ENST00000596554 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
C19orf48-206ENST00000596554 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
C19orf48-206ENST00000596554 ZNF541Q9H0D2 1346 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 RIC1Q4ADV7 1423 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 TNS4Q8IZW8 715 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
C19orf48-206ENST00000596554 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
C19orf48-206ENST00000596554 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
C19orf48-206ENST00000596554 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
C19orf48-206ENST00000596554 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
C19orf48-206ENST00000596554 FZD9O00144 591 aa17.23■□□□□ 0.35
C19orf48-206ENST00000596554 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
C19orf48-206ENST00000596554 PSMD1Q99460 953 aa17.23■□□□□ 0.35
C19orf48-206ENST00000596554 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
C19orf48-206ENST00000596554 ITGBL1O95965 494 aaPredicted RBP17.22■□□□□ 0.35
C19orf48-206ENST00000596554 NEFMP07197 916 aa17.22■□□□□ 0.35
C19orf48-206ENST00000596554 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
C19orf48-206ENST00000596554 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
C19orf48-206ENST00000596554 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
C19orf48-206ENST00000596554 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
C19orf48-206ENST00000596554 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
C19orf48-206ENST00000596554 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
C19orf48-206ENST00000596554 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
C19orf48-206ENST00000596554 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
C19orf48-206ENST00000596554 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
C19orf48-206ENST00000596554 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
C19orf48-206ENST00000596554 COL4A5P29400 1685 aa17.2■□□□□ 0.34
C19orf48-206ENST00000596554 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
C19orf48-206ENST00000596554 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
C19orf48-206ENST00000596554 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
C19orf48-206ENST00000596554 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
C19orf48-206ENST00000596554 EPHX2P34913 555 aa17.19■□□□□ 0.34
C19orf48-206ENST00000596554 GPC2Q8N158 579 aa17.19■□□□□ 0.34
C19orf48-206ENST00000596554 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
C19orf48-206ENST00000596554 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
C19orf48-206ENST00000596554 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
C19orf48-206ENST00000596554 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms