RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 KIF6Q6ZMV9 814 aa25.25■■□□□ 1.63
LSM4-203ENST00000593829 E9PSI1 815 aa25.25■■□□□ 1.63
LSM4-203ENST00000593829 NFIXQ14938 502 aa25.25■■□□□ 1.63
LSM4-203ENST00000593829 ZNF652Q9Y2D9 606 aa25.25■■□□□ 1.63
LSM4-203ENST00000593829 RGL2O15211 777 aa25.24■■□□□ 1.63
LSM4-203ENST00000593829 EXOSC9Q06265 439 aaKnown RBP25.24■■□□□ 1.63
LSM4-203ENST00000593829 CCDC30Q5VVM6 783 aa25.24■■□□□ 1.63
LSM4-203ENST00000593829 CLEC4GQ6UXB4 293 aa25.24■■□□□ 1.63
LSM4-203ENST00000593829 TTLL7Q6ZT98 887 aa25.24■■□□□ 1.63
LSM4-203ENST00000593829 KLHL34Q8N239 644 aa25.24■■□□□ 1.63
LSM4-203ENST00000593829 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
LSM4-203ENST00000593829 ERVV-1B6SEH8 477 aa25.23■■□□□ 1.63
LSM4-203ENST00000593829 DDR1Q08345 913 aa25.23■■□□□ 1.63
LSM4-203ENST00000593829 MAP3K15Q6ZN16 1313 aa25.23■■□□□ 1.63
LSM4-203ENST00000593829 HNRNPUQ00839 825 aaKnown RBP eCLIP25.22■■□□□ 1.63
LSM4-203ENST00000593829 TBC1D9BQ66K14 1250 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 BICDL1Q6ZP65 573 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 HYPKQ9NX55 129 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 POLRMTO00411 1230 aaKnown RBP25.22■■□□□ 1.63
LSM4-203ENST00000593829 SLFN5Q08AF3 891 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 COPS6Q7L5N1 327 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 SYT17Q9BSW7 474 aa25.22■■□□□ 1.63
LSM4-203ENST00000593829 XAGE3Q8WTP9 111 aa25.21■■□□□ 1.63
LSM4-203ENST00000593829 AIMP1Q12904 312 aaKnown RBP25.2■■□□□ 1.62
LSM4-203ENST00000593829 RBM19Q9Y4C8 960 aaKnown RBP25.2■■□□□ 1.62
LSM4-203ENST00000593829 CD2APQ9Y5K6 639 aa25.2■■□□□ 1.62
LSM4-203ENST00000593829 HLFQ16534 295 aa25.2■■□□□ 1.62
LSM4-203ENST00000593829 ZBTB3Q9H5J0 574 aa25.2■■□□□ 1.62
LSM4-203ENST00000593829 VAMP4O75379 141 aa25.19■■□□□ 1.62
LSM4-203ENST00000593829 CDCA7LQ96GN5 454 aa25.19■■□□□ 1.62
LSM4-203ENST00000593829 SETDB2Q96T68 719 aa25.19■■□□□ 1.62
LSM4-203ENST00000593829 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
LSM4-203ENST00000593829 SERPINB2P05120 415 aa25.17■■□□□ 1.62
LSM4-203ENST00000593829 CARMIL3Q8ND23 1372 aa25.17■■□□□ 1.62
LSM4-203ENST00000593829 GIGYF2Q6Y7W6 1299 aaKnown RBP25.16■■□□□ 1.62
LSM4-203ENST00000593829 NIP7Q9Y221 180 aaKnown RBP eCLIP25.16■■□□□ 1.62
LSM4-203ENST00000593829 TRMT2AQ8IZ69 625 aaKnown RBP25.15■■□□□ 1.62
LSM4-203ENST00000593829 TCERG1O14776 1098 aaKnown RBP25.14■■□□□ 1.62
LSM4-203ENST00000593829 ERICH6BQ5W0A0 696 aa25.14■■□□□ 1.62
LSM4-203ENST00000593829 C10orf71Q711Q0 1435 aa25.14■■□□□ 1.61
LSM4-203ENST00000593829 ANKRD13DQ6ZTN6 518 aa25.14■■□□□ 1.61
LSM4-203ENST00000593829 PHAXQ9H814 394 aaKnown RBP25.14■■□□□ 1.61
LSM4-203ENST00000593829 NLGN2Q8NFZ4 835 aa25.13■■□□□ 1.61
LSM4-203ENST00000593829 ATP10DQ9P241 1426 aa25.13■■□□□ 1.61
LSM4-203ENST00000593829 PLBD2Q8NHP8 589 aa25.12■■□□□ 1.61
LSM4-203ENST00000593829 NUP98P52948 1817 aa25.12■■□□□ 1.61
LSM4-203ENST00000593829 SLC4A2P04920 1241 aa25.12■■□□□ 1.61
LSM4-203ENST00000593829 NRXN2Q9P2S2 1712 aa25.1■■□□□ 1.61
LSM4-203ENST00000593829 AFDNP55196 1824 aaKnown RBP25.1■■□□□ 1.61
LSM4-203ENST00000593829 HSP90AB3PQ58FF7 597 aa25.1■■□□□ 1.61
LSM4-203ENST00000593829 NBPF5PQ86XG9 351 aaPredicted RBP25.1■■□□□ 1.61
LSM4-203ENST00000593829 ZNF34Q8IZ26 560 aa25.1■■□□□ 1.61
LSM4-203ENST00000593829 NPHP1O15259 732 aa25.1■■□□□ 1.61
LSM4-203ENST00000593829 CNBD1Q8NA66 436 aa25.1■■□□□ 1.61
LSM4-203ENST00000593829 GPTP24298 496 aa25.09■■□□□ 1.61
LSM4-203ENST00000593829 TGFB2P61812 414 aa25.09■■□□□ 1.61
LSM4-203ENST00000593829 ZBED9Q6R2W3 1325 aa25.09■■□□□ 1.61
LSM4-203ENST00000593829 KIF13BQ9NQT8 1826 aa25.08■■□□□ 1.61
LSM4-203ENST00000593829 DDX58O95786 925 aaKnown RBP25.08■■□□□ 1.61
LSM4-203ENST00000593829 PRR5LQ6MZQ0 368 aa25.08■■□□□ 1.61
LSM4-203ENST00000593829 TCIRG1Q13488 830 aa25.08■■□□□ 1.6
LSM4-203ENST00000593829 TPTE2Q6XPS3 522 aa25.08■■□□□ 1.6
LSM4-203ENST00000593829 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.6
LSM4-203ENST00000593829 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 UBN2Q6ZU65 1347 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 ST5P78524 1137 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 PARP10Q53GL7 1025 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 G2E3Q7L622 706 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 NYXQ9GZU5 481 aa25.06■■□□□ 1.6
LSM4-203ENST00000593829 ZNF428Q96B54 188 aa25.05■■□□□ 1.6
LSM4-203ENST00000593829 FLIIQ13045 1269 aa25.04■■□□□ 1.6
LSM4-203ENST00000593829 PXDNLA1KZ92 1463 aa25.04■■□□□ 1.6
LSM4-203ENST00000593829 GTF2E1P29083 439 aaPredicted RBP25.04■■□□□ 1.6
LSM4-203ENST00000593829 CCDC24Q8N4L8 307 aa25.04■■□□□ 1.6
LSM4-203ENST00000593829 BRIP1Q9BX63 1249 aa25.04■■□□□ 1.6
LSM4-203ENST00000593829 A0A0G2JLW4 131 aa25.03■■□□□ 1.6
LSM4-203ENST00000593829 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
LSM4-203ENST00000593829 CT47B1P0C2W7 299 aaPredicted RBP25.03■■□□□ 1.6
LSM4-203ENST00000593829 SUSD4Q5VX71 490 aa25.03■■□□□ 1.6
LSM4-203ENST00000593829 KSR2Q6VAB6 950 aa25.03■■□□□ 1.6
LSM4-203ENST00000593829 PPP1R42Q7Z4L9 355 aa25.03■■□□□ 1.6
LSM4-203ENST00000593829 IBTKQ9P2D0 1353 aaPredicted RBP25.03■■□□□ 1.6
LSM4-203ENST00000593829 DPEP1P16444 411 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 CACNA1FO60840 1977 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 PI4KAP2A4QPH2 592 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 NLRP10Q86W26 655 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 PI4KAP1Q8N8J0 262 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 MAP3K2Q9Y2U5 619 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 ANKRD36CQ5JPF3 1778 aa25.02■■□□□ 1.6
LSM4-203ENST00000593829 ARFGEF2Q9Y6D5 1785 aa25.01■■□□□ 1.59
LSM4-203ENST00000593829 PDE6BP35913 854 aa25.01■■□□□ 1.59
LSM4-203ENST00000593829 ISCA1Q9BUE6 129 aa25.01■■□□□ 1.59
LSM4-203ENST00000593829 FKBP5Q13451 457 aaPredicted RBP25■■□□□ 1.59
LSM4-203ENST00000593829 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
LSM4-203ENST00000593829 UTP14AQ9BVJ6 771 aaKnown RBP25■■□□□ 1.59
LSM4-203ENST00000593829 ATP5J2-PTCD1G3V325 749 aa25■■□□□ 1.59
LSM4-203ENST00000593829 NTSR2O95665 410 aa25■■□□□ 1.59
LSM4-203ENST00000593829 KIAA1551Q9HCM1 1747 aa25■■□□□ 1.59
LSM4-203ENST00000593829 ADCY9O60503 1353 aa24.99■■□□□ 1.59
LSM4-203ENST00000593829 CHRNA5P30532 468 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms