RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 BICDL1Q6ZP65 573 aa26.68■■□□□ 1.86
DNMT1-227ENST00000592342 LRP10Q7Z4F1 713 aa26.68■■□□□ 1.86
DNMT1-227ENST00000592342 BCL2L12Q9HB09 334 aa26.68■■□□□ 1.86
DNMT1-227ENST00000592342 PARP3Q9Y6F1 533 aa26.68■■□□□ 1.86
DNMT1-227ENST00000592342 LRP5O75197 1615 aa26.68■■□□□ 1.86
DNMT1-227ENST00000592342 MAP3K15Q6ZN16 1313 aa26.67■■□□□ 1.86
DNMT1-227ENST00000592342 TRMT2AQ8IZ69 625 aaKnown RBP26.67■■□□□ 1.86
DNMT1-227ENST00000592342 ZBTB3Q9H5J0 574 aa26.67■■□□□ 1.86
DNMT1-227ENST00000592342 ERVV-1B6SEH8 477 aa26.66■■□□□ 1.86
DNMT1-227ENST00000592342 CLEC4GQ6UXB4 293 aa26.66■■□□□ 1.86
DNMT1-227ENST00000592342 KLHL34Q8N239 644 aa26.65■■□□□ 1.86
DNMT1-227ENST00000592342 SCN7AQ01118 1682 aa26.65■■□□□ 1.86
DNMT1-227ENST00000592342 SLC4A2P04920 1241 aa26.64■■□□□ 1.86
DNMT1-227ENST00000592342 NFIXQ14938 502 aa26.64■■□□□ 1.86
DNMT1-227ENST00000592342 TBC1D9BQ66K14 1250 aa26.64■■□□□ 1.86
DNMT1-227ENST00000592342 PHAXQ9H814 394 aaKnown RBP26.64■■□□□ 1.86
DNMT1-227ENST00000592342 RGL2O15211 777 aa26.63■■□□□ 1.85
DNMT1-227ENST00000592342 HLFQ16534 295 aa26.63■■□□□ 1.85
DNMT1-227ENST00000592342 TM4SF1P30408 202 aa26.62■■□□□ 1.85
DNMT1-227ENST00000592342 SETDB2Q96T68 719 aa26.62■■□□□ 1.85
DNMT1-227ENST00000592342 COL24A1Q17RW2 1714 aa26.62■■□□□ 1.85
DNMT1-227ENST00000592342 BCORQ6W2J9 1755 aa26.61■■□□□ 1.85
DNMT1-227ENST00000592342 ANKRD13DQ6ZTN6 518 aa26.61■■□□□ 1.85
DNMT1-227ENST00000592342 YTHDC1Q96MU7 727 aaKnown RBP26.61■■□□□ 1.85
DNMT1-227ENST00000592342 DDX58O95786 925 aaKnown RBP26.6■■□□□ 1.85
DNMT1-227ENST00000592342 CT47B1P0C2W7 299 aaPredicted RBP26.6■■□□□ 1.85
DNMT1-227ENST00000592342 DDR1Q08345 913 aa26.6■■□□□ 1.85
DNMT1-227ENST00000592342 GIGYF2Q6Y7W6 1299 aaKnown RBP26.6■■□□□ 1.85
DNMT1-227ENST00000592342 PLBD2Q8NHP8 589 aa26.6■■□□□ 1.85
DNMT1-227ENST00000592342 NIP7Q9Y221 180 aaKnown RBP eCLIP26.6■■□□□ 1.85
DNMT1-227ENST00000592342 POLRMTO00411 1230 aaKnown RBP26.59■■□□□ 1.85
DNMT1-227ENST00000592342 NPHP1O15259 732 aa26.59■■□□□ 1.85
DNMT1-227ENST00000592342 RIC3Q7Z5B4 369 aa26.59■■□□□ 1.85
DNMT1-227ENST00000592342 ZNF428Q96B54 188 aa26.59■■□□□ 1.85
DNMT1-227ENST00000592342 SERPINB2P05120 415 aa26.58■■□□□ 1.85
DNMT1-227ENST00000592342 HSP90AB3PQ58FF7 597 aa26.58■■□□□ 1.85
DNMT1-227ENST00000592342 CARMIL3Q8ND23 1372 aa26.58■■□□□ 1.84
DNMT1-227ENST00000592342 FHDC1Q9C0D6 1143 aaPredicted RBP26.56■■□□□ 1.84
DNMT1-227ENST00000592342 GPTP24298 496 aa26.55■■□□□ 1.84
DNMT1-227ENST00000592342 FLIIQ13045 1269 aa26.55■■□□□ 1.84
DNMT1-227ENST00000592342 G2E3Q7L622 706 aa26.55■■□□□ 1.84
DNMT1-227ENST00000592342 FAM177BA6PVY3 158 aa26.54■■□□□ 1.84
DNMT1-227ENST00000592342 FKBP5Q13451 457 aaPredicted RBP26.54■■□□□ 1.84
DNMT1-227ENST00000592342 NBPF5PQ86XG9 351 aaPredicted RBP26.54■■□□□ 1.84
DNMT1-227ENST00000592342 ATP10DQ9P241 1426 aa26.54■■□□□ 1.84
DNMT1-227ENST00000592342 TCIRG1Q13488 830 aa26.53■■□□□ 1.84
DNMT1-227ENST00000592342 ALDH1L2Q3SY69 923 aa26.53■■□□□ 1.84
DNMT1-227ENST00000592342 KSR2Q6VAB6 950 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 ZNF34Q8IZ26 560 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 CNBD1Q8NA66 436 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 SSH1Q8WYL5 1049 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 SMC4Q9NTJ3 1288 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 CD2APQ9Y5K6 639 aa26.52■■□□□ 1.84
DNMT1-227ENST00000592342 PI4KAP2A4QPH2 592 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 GTF2E1P29083 439 aaPredicted RBP26.51■■□□□ 1.83
DNMT1-227ENST00000592342 PARP10Q53GL7 1025 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 PI4KAP1Q8N8J0 262 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 SYT17Q9BSW7 474 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 BCL2L13Q9BXK5 485 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 MAP3K2Q9Y2U5 619 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 NUP98P52948 1817 aa26.51■■□□□ 1.83
DNMT1-227ENST00000592342 TPTE2Q6XPS3 522 aa26.5■■□□□ 1.83
DNMT1-227ENST00000592342 ST5P78524 1137 aa26.49■■□□□ 1.83
DNMT1-227ENST00000592342 PPP1R42Q7Z4L9 355 aa26.49■■□□□ 1.83
DNMT1-227ENST00000592342 MRPL50Q8N5N7 158 aaKnown RBP26.49■■□□□ 1.83
DNMT1-227ENST00000592342 MYD88Q99836 296 aa26.49■■□□□ 1.83
DNMT1-227ENST00000592342 NYXQ9GZU5 481 aa26.49■■□□□ 1.83
DNMT1-227ENST00000592342 UBN2Q6ZU65 1347 aa26.48■■□□□ 1.83
DNMT1-227ENST00000592342 NEXNQ0ZGT2 675 aa26.48■■□□□ 1.83
DNMT1-227ENST00000592342 PRR5LQ6MZQ0 368 aa26.48■■□□□ 1.83
DNMT1-227ENST00000592342 C10orf71Q711Q0 1435 aa26.48■■□□□ 1.83
DNMT1-227ENST00000592342 ATP5J2-PTCD1G3V325 749 aa26.47■■□□□ 1.83
DNMT1-227ENST00000592342 SUSD4Q5VX71 490 aa26.47■■□□□ 1.83
DNMT1-227ENST00000592342 METTL22Q9BUU2 404 aaPredicted RBP26.47■■□□□ 1.83
DNMT1-227ENST00000592342 CACNA1FO60840 1977 aa26.46■■□□□ 1.83
DNMT1-227ENST00000592342 RARSP54136 660 aaKnown RBP26.46■■□□□ 1.83
DNMT1-227ENST00000592342 CCDC24Q8N4L8 307 aa26.46■■□□□ 1.83
DNMT1-227ENST00000592342 ADCY9O60503 1353 aa26.46■■□□□ 1.83
DNMT1-227ENST00000592342 NLRP10Q86W26 655 aa26.45■■□□□ 1.82
DNMT1-227ENST00000592342 DNAAF4Q8WXU2 420 aa26.45■■□□□ 1.82
DNMT1-227ENST00000592342 ISCA1Q9BUE6 129 aa26.45■■□□□ 1.82
DNMT1-227ENST00000592342 UTP14AQ9BVJ6 771 aaKnown RBP26.45■■□□□ 1.82
DNMT1-227ENST00000592342 ARFGEF2Q9Y6D5 1785 aa26.45■■□□□ 1.82
DNMT1-227ENST00000592342 NLGN2Q8NFZ4 835 aa26.44■■□□□ 1.82
DNMT1-227ENST00000592342 AFDNP55196 1824 aaKnown RBP26.44■■□□□ 1.82
DNMT1-227ENST00000592342 TGFB2P61812 414 aa26.43■■□□□ 1.82
DNMT1-227ENST00000592342 TRMT112Q9UI30 125 aaKnown RBP26.43■■□□□ 1.82
DNMT1-227ENST00000592342 IBTKQ9P2D0 1353 aaPredicted RBP26.43■■□□□ 1.82
DNMT1-227ENST00000592342 NRXN2Q9P2S2 1712 aa26.42■■□□□ 1.82
DNMT1-227ENST00000592342 PTPRCP08575 1304 aa26.42■■□□□ 1.82
DNMT1-227ENST00000592342 NUTM1Q86Y26 1132 aa26.42■■□□□ 1.82
DNMT1-227ENST00000592342 ANKRD36CQ5JPF3 1778 aa26.42■■□□□ 1.82
DNMT1-227ENST00000592342 F6X3S4 739 aa26.41■■□□□ 1.82
DNMT1-227ENST00000592342 NTSR2O95665 410 aa26.41■■□□□ 1.82
DNMT1-227ENST00000592342 PDE6BP35913 854 aa26.41■■□□□ 1.82
DNMT1-227ENST00000592342 BRIP1Q9BX63 1249 aa26.41■■□□□ 1.82
DNMT1-227ENST00000592342 TRIM28Q13263 835 aaKnown RBP26.4■■□□□ 1.82
DNMT1-227ENST00000592342 ERFEQ4G0M1 354 aa26.4■■□□□ 1.82
DNMT1-227ENST00000592342 CCDC191Q8NCU4 936 aa26.4■■□□□ 1.82
DNMT1-227ENST00000592342 RNF123Q5XPI4 1314 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms