RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 NPHP1O15259 732 aa30.09■■■□□ 2.41
CXXC1-216ENST00000591474 U2AF1L5P0DN76 240 aaPredicted RBP30.09■■■□□ 2.41
CXXC1-216ENST00000591474 U2AF1Q01081 240 aaKnown RBP eCLIP30.09■■■□□ 2.41
CXXC1-216ENST00000591474 CACNA1SQ13698 1873 aa30.09■■■□□ 2.41
CXXC1-216ENST00000591474 DPY19L2Q6NUT2 758 aa30.09■■■□□ 2.41
CXXC1-216ENST00000591474 CLEC4GQ6UXB4 293 aa30.09■■■□□ 2.41
CXXC1-216ENST00000591474 SLX4Q8IY92 1834 aa30.09■■■□□ 2.41
CXXC1-216ENST00000591474 ZNF219Q9P2Y4 722 aaPredicted RBP30.09■■■□□ 2.41
CXXC1-216ENST00000591474 PRAMEF22A3QJZ6 481 aa30.08■■■□□ 2.41
CXXC1-216ENST00000591474 SNRPA1P09661 255 aaKnown RBP30.08■■■□□ 2.41
CXXC1-216ENST00000591474 SRGNP10124 158 aa30.08■■■□□ 2.41
CXXC1-216ENST00000591474 PPP2R1AP30153 589 aa30.08■■■□□ 2.41
CXXC1-216ENST00000591474 MCM10Q7L590 875 aa30.08■■■□□ 2.41
CXXC1-216ENST00000591474 POTECB2RU33 542 aa30.07■■■□□ 2.4
CXXC1-216ENST00000591474 PIP4K2AP48426 406 aaPredicted RBP30.07■■■□□ 2.4
CXXC1-216ENST00000591474 ERFEQ4G0M1 354 aa30.07■■■□□ 2.4
CXXC1-216ENST00000591474 MASTLQ96GX5 879 aa30.06■■■□□ 2.4
CXXC1-216ENST00000591474 TAOK3Q9H2K8 898 aa30.06■■■□□ 2.4
CXXC1-216ENST00000591474 HTATSF1O43719 755 aaKnown RBP30.05■■■□□ 2.4
CXXC1-216ENST00000591474 SOGA3Q5TF21 947 aa30.05■■■□□ 2.4
CXXC1-216ENST00000591474 PRPF40BQ6NWY9 871 aaKnown RBP30.05■■■□□ 2.4
CXXC1-216ENST00000591474 ZNF652Q9Y2D9 606 aa30.05■■■□□ 2.4
CXXC1-216ENST00000591474 RGL2O15211 777 aa30.04■■■□□ 2.4
CXXC1-216ENST00000591474 NBPF5PQ86XG9 351 aaPredicted RBP30.03■■■□□ 2.4
CXXC1-216ENST00000591474 DCTN1Q14203 1278 aa30.01■■■□□ 2.39
CXXC1-216ENST00000591474 LAMB4A4D0S4 1761 aa30■■■□□ 2.39
CXXC1-216ENST00000591474 NBPF26B4DH59 902 aa29.99■■■□□ 2.39
CXXC1-216ENST00000591474 NBPF10Q6P3W6 841 aaKnown RBP29.99■■■□□ 2.39
CXXC1-216ENST00000591474 NBPF15Q8N660 670 aa29.99■■■□□ 2.39
CXXC1-216ENST00000591474 KLRG2A4D1S0 409 aaPredicted RBP29.98■■■□□ 2.39
CXXC1-216ENST00000591474 C7orf43Q8WVR3 580 aa29.98■■■□□ 2.39
CXXC1-216ENST00000591474 NPR1P16066 1061 aa29.97■■■□□ 2.39
CXXC1-216ENST00000591474 TAF7Q15545 349 aaPredicted RBP29.97■■■□□ 2.39
CXXC1-216ENST00000591474 TPTE2Q6XPS3 522 aa29.96■■■□□ 2.39
CXXC1-216ENST00000591474 NIP7Q9Y221 180 aaKnown RBP eCLIP29.96■■■□□ 2.39
CXXC1-216ENST00000591474 DDNO94850 711 aaPredicted RBP29.94■■■□□ 2.38
CXXC1-216ENST00000591474 CCDC93Q567U6 631 aa29.94■■■□□ 2.38
CXXC1-216ENST00000591474 DLG5Q8TDM6 1919 aa29.94■■■□□ 2.38
CXXC1-216ENST00000591474 KDM3BQ7LBC6 1761 aa29.93■■■□□ 2.38
CXXC1-216ENST00000591474 COL13A1Q5TAT6 717 aaPredicted RBP29.93■■■□□ 2.38
CXXC1-216ENST00000591474 HLFQ16534 295 aa29.91■■■□□ 2.38
CXXC1-216ENST00000591474 CHADLQ6NUI6 762 aa29.91■■■□□ 2.38
CXXC1-216ENST00000591474 SCN4AP35499 1836 aa29.9■■■□□ 2.38
CXXC1-216ENST00000591474 FKBP4Q02790 459 aaKnown RBP eCLIP29.9■■■□□ 2.38
CXXC1-216ENST00000591474 MIS18AQ9NYP9 233 aa29.9■■■□□ 2.38
CXXC1-216ENST00000591474 PNISRQ8TF01 805 aaKnown RBP29.89■■■□□ 2.38
CXXC1-216ENST00000591474 L3MBTL3Q96JM7 780 aaPredicted RBP29.89■■■□□ 2.38
CXXC1-216ENST00000591474 IQCA1LA6NCM1 817 aa29.88■■■□□ 2.37
CXXC1-216ENST00000591474 NEFMP07197 916 aa29.88■■■□□ 2.37
CXXC1-216ENST00000591474 POTEIP0CG38 1075 aa29.88■■■□□ 2.37
CXXC1-216ENST00000591474 POTEJP0CG39 1038 aa29.88■■■□□ 2.37
CXXC1-216ENST00000591474 CREBZFQ9NS37 354 aa29.87■■■□□ 2.37
CXXC1-216ENST00000591474 FAM177BA6PVY3 158 aa29.86■■■□□ 2.37
CXXC1-216ENST00000591474 RTKN2Q8IZC4 609 aa29.86■■■□□ 2.37
CXXC1-216ENST00000591474 PLEKHF1Q96S99 279 aa29.86■■■□□ 2.37
CXXC1-216ENST00000591474 NUP98P52948 1817 aa29.86■■■□□ 2.37
CXXC1-216ENST00000591474 ERVV-1B6SEH8 477 aa29.85■■■□□ 2.37
CXXC1-216ENST00000591474 HSPA1AP0DMV8 641 aaKnown RBP29.85■■■□□ 2.37
CXXC1-216ENST00000591474 HSPA1BP0DMV9 641 aaKnown RBP29.85■■■□□ 2.37
CXXC1-216ENST00000591474 ALDH1B1P30837 517 aa29.85■■■□□ 2.37
CXXC1-216ENST00000591474 NYXQ9GZU5 481 aa29.84■■■□□ 2.37
CXXC1-216ENST00000591474 ZNF277Q9NRM2 450 aaPredicted RBP29.84■■■□□ 2.37
CXXC1-216ENST00000591474 GTF2E1P29083 439 aaPredicted RBP29.83■■■□□ 2.37
CXXC1-216ENST00000591474 EIF4A1P60842 406 aaKnown RBP29.83■■■□□ 2.37
CXXC1-216ENST00000591474 CRY2Q49AN0 593 aa29.83■■■□□ 2.37
CXXC1-216ENST00000591474 OLFM4Q6UX06 510 aa29.83■■■□□ 2.37
CXXC1-216ENST00000591474 LDHDQ86WU2 507 aa29.83■■■□□ 2.37
CXXC1-216ENST00000591474 TAF1DQ9H5J8 278 aaPredicted RBP29.83■■■□□ 2.37
CXXC1-216ENST00000591474 SNED1Q8TER0 1413 aa29.82■■■□□ 2.36
CXXC1-216ENST00000591474 ABCC12Q96J65 1359 aa29.82■■■□□ 2.36
CXXC1-216ENST00000591474 MAP3K15Q6ZN16 1313 aa29.82■■■□□ 2.36
CXXC1-216ENST00000591474 ZNF541Q9H0D2 1346 aa29.81■■■□□ 2.36
CXXC1-216ENST00000591474 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
CXXC1-216ENST00000591474 RIC1Q4ADV7 1423 aa29.8■■■□□ 2.36
CXXC1-216ENST00000591474 IBTKQ9P2D0 1353 aaPredicted RBP29.8■■■□□ 2.36
CXXC1-216ENST00000591474 NGEFQ8N5V2 710 aa29.8■■■□□ 2.36
CXXC1-216ENST00000591474 PASKQ96RG2 1323 aa29.79■■■□□ 2.36
CXXC1-216ENST00000591474 IARSP41252 1262 aaKnown RBP29.79■■■□□ 2.36
CXXC1-216ENST00000591474 KIF6Q6ZMV9 814 aa29.79■■■□□ 2.36
CXXC1-216ENST00000591474 TTLL7Q6ZT98 887 aa29.78■■■□□ 2.36
CXXC1-216ENST00000591474 NUTM1Q86Y26 1132 aa29.78■■■□□ 2.36
CXXC1-216ENST00000591474 TNS4Q8IZW8 715 aa29.78■■■□□ 2.36
CXXC1-216ENST00000591474 SYNE4Q8N205 404 aa29.78■■■□□ 2.36
CXXC1-216ENST00000591474 PSMD1Q99460 953 aa29.78■■■□□ 2.36
CXXC1-216ENST00000591474 ADAMTSL1Q8N6G6 1762 aa29.77■■■□□ 2.36
CXXC1-216ENST00000591474 FZD9O00144 591 aa29.77■■■□□ 2.36
CXXC1-216ENST00000591474 RRP7AQ9Y3A4 280 aaKnown RBP29.77■■■□□ 2.36
CXXC1-216ENST00000591474 THUMPD2Q9BTF0 503 aaKnown RBP29.76■■■□□ 2.35
CXXC1-216ENST00000591474 PNNQ9H307 717 aaKnown RBP29.76■■■□□ 2.35
CXXC1-216ENST00000591474 MKRN1Q9UHC7 482 aaKnown RBP29.76■■■□□ 2.35
CXXC1-216ENST00000591474 HACL1Q9UJ83 578 aa29.76■■■□□ 2.35
CXXC1-216ENST00000591474 ERBB4Q15303 1308 aa29.75■■■□□ 2.35
CXXC1-216ENST00000591474 UBN2Q6ZU65 1347 aa29.75■■■□□ 2.35
CXXC1-216ENST00000591474 CC2D2BQ6DHV5 1058 aa29.75■■■□□ 2.35
CXXC1-216ENST00000591474 MYL6BP14649 208 aa29.74■■■□□ 2.35
CXXC1-216ENST00000591474 CNTNAP1P78357 1384 aa29.74■■■□□ 2.35
CXXC1-216ENST00000591474 MAPK8IP3Q9UPT6 1336 aa29.73■■■□□ 2.35
CXXC1-216ENST00000591474 HOXA10P31260 410 aaPredicted RBP29.73■■■□□ 2.35
CXXC1-216ENST00000591474 ZBTB3Q9H5J0 574 aa29.73■■■□□ 2.35
CXXC1-216ENST00000591474 GPTP24298 496 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms