RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZNF521Q96K83 1311 aa27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 CYP19A1P11511 503 aaPredicted RBP27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 PRELPP51888 382 aa27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 EIF4A1P60842 406 aaKnown RBP27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 TTLL6Q8N841 843 aa27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 CFAP44Q96MT7 982 aa27.97■■■□□ 2.07
R3HDM4-206ENST00000590454 SPINK5Q9NQ38 1064 aaPredicted RBP27.96■■■□□ 2.07
R3HDM4-206ENST00000590454 MBIPQ9NS73 344 aa27.96■■■□□ 2.07
R3HDM4-206ENST00000590454 IFT57Q9NWB7 429 aa27.96■■■□□ 2.07
R3HDM4-206ENST00000590454 SERPINB2P05120 415 aa27.95■■■□□ 2.06
R3HDM4-206ENST00000590454 CALD1Q05682 793 aaKnown RBP27.95■■■□□ 2.06
R3HDM4-206ENST00000590454 BABAM1Q9NWV8 329 aa27.95■■■□□ 2.06
R3HDM4-206ENST00000590454 KRT24Q2M2I5 525 aa27.94■■■□□ 2.06
R3HDM4-206ENST00000590454 NGEFQ8N5V2 710 aa27.94■■■□□ 2.06
R3HDM4-206ENST00000590454 C2CD5Q86YS7 1000 aa27.93■■■□□ 2.06
R3HDM4-206ENST00000590454 WDR63Q8IWG1 891 aa27.93■■■□□ 2.06
R3HDM4-206ENST00000590454 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
R3HDM4-206ENST00000590454 TSR2Q969E8 191 aaKnown RBP27.93■■■□□ 2.06
R3HDM4-206ENST00000590454 COL15A1P39059 1388 aa27.93■■■□□ 2.06
R3HDM4-206ENST00000590454 H0YIN7 160 aa27.92■■■□□ 2.06
R3HDM4-206ENST00000590454 HSPA1AP0DMV8 641 aaKnown RBP27.92■■■□□ 2.06
R3HDM4-206ENST00000590454 HSPA1BP0DMV9 641 aaKnown RBP27.92■■■□□ 2.06
R3HDM4-206ENST00000590454 GNAI1P63096 354 aa27.92■■■□□ 2.06
R3HDM4-206ENST00000590454 BCL2L12Q9HB09 334 aa27.91■■■□□ 2.06
R3HDM4-206ENST00000590454 ZBTB1Q9Y2K1 713 aa27.91■■■□□ 2.06
R3HDM4-206ENST00000590454 USP16Q9Y5T5 823 aa27.91■■■□□ 2.06
R3HDM4-206ENST00000590454 IL16Q14005 1332 aa27.91■■■□□ 2.06
R3HDM4-206ENST00000590454 DPY19L2Q6NUT2 758 aa27.9■■■□□ 2.06
R3HDM4-206ENST00000590454 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.06
R3HDM4-206ENST00000590454 HNRNPUQ00839 825 aaKnown RBP eCLIP27.89■■■□□ 2.06
R3HDM4-206ENST00000590454 NFKBIEO00221 500 aa27.88■■■□□ 2.05
R3HDM4-206ENST00000590454 NRXN2Q9P2S2 1712 aa27.87■■■□□ 2.05
R3HDM4-206ENST00000590454 AFDNP55196 1824 aaKnown RBP27.86■■■□□ 2.05
R3HDM4-206ENST00000590454 POTECB2RU33 542 aa27.86■■■□□ 2.05
R3HDM4-206ENST00000590454 CANXP27824 592 aaKnown RBP27.85■■■□□ 2.05
R3HDM4-206ENST00000590454 CDCA7LQ96GN5 454 aa27.85■■■□□ 2.05
R3HDM4-206ENST00000590454 FANCIQ9NVI1 1328 aa27.85■■■□□ 2.05
R3HDM4-206ENST00000590454 A1BGP04217 495 aa27.84■■■□□ 2.05
R3HDM4-206ENST00000590454 PIP4K2AP48426 406 aaPredicted RBP27.84■■■□□ 2.05
R3HDM4-206ENST00000590454 BICDL1Q6ZP65 573 aa27.84■■■□□ 2.05
R3HDM4-206ENST00000590454 C8orf58Q8NAV2 365 aa27.84■■■□□ 2.05
R3HDM4-206ENST00000590454 PDZRN3Q9UPQ7 1066 aa27.84■■■□□ 2.05
R3HDM4-206ENST00000590454 LAMB4A4D0S4 1761 aa27.83■■■□□ 2.05
R3HDM4-206ENST00000590454 A0A087WZG4 1122 aa27.83■■■□□ 2.05
R3HDM4-206ENST00000590454 TEX13AQ9BXU3 409 aaPredicted RBP27.83■■■□□ 2.05
R3HDM4-206ENST00000590454 CARMIL3Q8ND23 1372 aa27.83■■■□□ 2.05
R3HDM4-206ENST00000590454 DLEC1Q9Y238 1755 aa27.83■■■□□ 2.05
R3HDM4-206ENST00000590454 STARD3NLO95772 234 aa27.82■■■□□ 2.04
R3HDM4-206ENST00000590454 ZNF622Q969S3 477 aaKnown RBP eCLIP27.82■■■□□ 2.04
R3HDM4-206ENST00000590454 ELL2O00472 640 aaPredicted RBP27.81■■■□□ 2.04
R3HDM4-206ENST00000590454 PDE6BP35913 854 aa27.81■■■□□ 2.04
R3HDM4-206ENST00000590454 GOLGA2Q08379 1002 aa27.81■■■□□ 2.04
R3HDM4-206ENST00000590454 ERFEQ4G0M1 354 aa27.81■■■□□ 2.04
R3HDM4-206ENST00000590454 TSPYL6Q8N831 410 aa27.81■■■□□ 2.04
R3HDM4-206ENST00000590454 EIF5P55010 431 aaKnown RBP27.8■■■□□ 2.04
R3HDM4-206ENST00000590454 DUSP27Q5VZP5 1158 aa27.8■■■□□ 2.04
R3HDM4-206ENST00000590454 BRIP1Q9BX63 1249 aa27.8■■■□□ 2.04
R3HDM4-206ENST00000590454 TIAM2Q8IVF5 1701 aa27.79■■■□□ 2.04
R3HDM4-206ENST00000590454 C21orf2O43822 256 aa27.79■■■□□ 2.04
R3HDM4-206ENST00000590454 NECTIN2Q92692 538 aa27.79■■■□□ 2.04
R3HDM4-206ENST00000590454 NBPF26B4DH59 902 aa27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 EIF2S2P20042 333 aaKnown RBP27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 SLFN5Q08AF3 891 aa27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 TBC1D9BQ66K14 1250 aa27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 NBPF10Q6P3W6 841 aaKnown RBP27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 NBPF15Q8N660 670 aa27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 CREBZFQ9NS37 354 aa27.78■■■□□ 2.04
R3HDM4-206ENST00000590454 CHADLQ6NUI6 762 aa27.77■■■□□ 2.04
R3HDM4-206ENST00000590454 ZNF219Q9P2Y4 722 aaPredicted RBP27.77■■■□□ 2.04
R3HDM4-206ENST00000590454 EXOSC9Q06265 439 aaKnown RBP27.76■■■□□ 2.03
R3HDM4-206ENST00000590454 MYH16Q9H6N6 1097 aa27.76■■■□□ 2.03
R3HDM4-206ENST00000590454 PCNTO95613 3336 aa27.75■■■□□ 2.03
R3HDM4-206ENST00000590454 LTBP3Q9NS15 1303 aa27.74■■■□□ 2.03
R3HDM4-206ENST00000590454 E9PSI1 815 aa27.74■■■□□ 2.03
R3HDM4-206ENST00000590454 PRR5LQ6MZQ0 368 aa27.74■■■□□ 2.03
R3HDM4-206ENST00000590454 TAOK3Q9H2K8 898 aa27.74■■■□□ 2.03
R3HDM4-206ENST00000590454 CCDC88AQ3V6T2 1871 aa27.74■■■□□ 2.03
R3HDM4-206ENST00000590454 MKRN1Q9UHC7 482 aaKnown RBP27.73■■■□□ 2.03
R3HDM4-206ENST00000590454 ANXA1P04083 346 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 PDIA6Q15084 440 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 PROSER3Q2NL68 480 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 TRMT2AQ8IZ69 625 aaKnown RBP27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 CCDC24Q8N4L8 307 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 CNKSR1Q969H4 720 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 TBC1D2BQ9UPU7 963 aa27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 ZNF330Q9Y3S2 320 aaPredicted RBP27.72■■■□□ 2.03
R3HDM4-206ENST00000590454 ZBED9Q6R2W3 1325 aa27.71■■■□□ 2.03
R3HDM4-206ENST00000590454 DDNO94850 711 aaPredicted RBP27.71■■■□□ 2.03
R3HDM4-206ENST00000590454 HOXB7P09629 217 aa27.71■■■□□ 2.03
R3HDM4-206ENST00000590454 HDGFL1Q5TGJ6 251 aa27.71■■■□□ 2.03
R3HDM4-206ENST00000590454 IL6STP40189 918 aaPredicted RBP27.7■■■□□ 2.02
R3HDM4-206ENST00000590454 TWISTNBQ3B726 338 aaPredicted RBP27.7■■■□□ 2.02
R3HDM4-206ENST00000590454 NPHP1O15259 732 aa27.69■■■□□ 2.02
R3HDM4-206ENST00000590454 MYL6BP14649 208 aa27.69■■■□□ 2.02
R3HDM4-206ENST00000590454 SOGA3Q5TF21 947 aa27.69■■■□□ 2.02
R3HDM4-206ENST00000590454 NPM2Q86SE8 214 aaKnown RBP27.69■■■□□ 2.02
R3HDM4-206ENST00000590454 SETDB2Q96T68 719 aa27.69■■■□□ 2.02
R3HDM4-206ENST00000590454 TCERG1O14776 1098 aaKnown RBP27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 POTEIP0CG38 1075 aa27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 POTEJP0CG39 1038 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms