RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 NBPF5PQ86XG9 351 aaPredicted RBP21.62■■□□□ 1.05
MBD3-206ENST00000589901 COL11A2P13942 1736 aaPredicted RBP21.62■■□□□ 1.05
MBD3-206ENST00000589901 BCORQ6W2J9 1755 aa21.61■■□□□ 1.05
MBD3-206ENST00000589901 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
MBD3-206ENST00000589901 ZNF652Q9Y2D9 606 aa21.61■■□□□ 1.05
MBD3-206ENST00000589901 NEFMP07197 916 aa21.6■■□□□ 1.05
MBD3-206ENST00000589901 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
MBD3-206ENST00000589901 PRPF40BQ6NWY9 871 aaKnown RBP21.6■■□□□ 1.05
MBD3-206ENST00000589901 THUMPD2Q9BTF0 503 aaKnown RBP21.6■■□□□ 1.05
MBD3-206ENST00000589901 TNRC6CQ9HCJ0 1690 aaKnown RBP21.6■■□□□ 1.05
MBD3-206ENST00000589901 VEGFAP15692 232 aaPredicted RBP21.59■■□□□ 1.05
MBD3-206ENST00000589901 CNKSR1Q969H4 720 aa21.59■■□□□ 1.05
MBD3-206ENST00000589901 MASTLQ96GX5 879 aa21.59■■□□□ 1.05
MBD3-206ENST00000589901 NIP7Q9Y221 180 aaKnown RBP eCLIP21.59■■□□□ 1.05
MBD3-206ENST00000589901 HLFQ16534 295 aa21.58■■□□□ 1.05
MBD3-206ENST00000589901 FAM177BA6PVY3 158 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 ERFEQ4G0M1 354 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 SMC1BQ8NDV3 1235 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
MBD3-206ENST00000589901 POTECB2RU33 542 aa21.56■■□□□ 1.04
MBD3-206ENST00000589901 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
MBD3-206ENST00000589901 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
MBD3-206ENST00000589901 LTBP3Q9NS15 1303 aa21.55■■□□□ 1.04
MBD3-206ENST00000589901 TIAM2Q8IVF5 1701 aa21.55■■□□□ 1.04
MBD3-206ENST00000589901 RGL2O15211 777 aa21.55■■□□□ 1.04
MBD3-206ENST00000589901 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
MBD3-206ENST00000589901 DPY19L2Q6NUT2 758 aa21.55■■□□□ 1.04
MBD3-206ENST00000589901 TPTE2Q6XPS3 522 aa21.55■■□□□ 1.04
MBD3-206ENST00000589901 KLRG2A4D1S0 409 aaPredicted RBP21.54■■□□□ 1.04
MBD3-206ENST00000589901 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
MBD3-206ENST00000589901 SLX4Q8IY92 1834 aa21.54■■□□□ 1.04
MBD3-206ENST00000589901 WDR90Q96KV7 1748 aa21.54■■□□□ 1.04
MBD3-206ENST00000589901 NPR1P16066 1061 aa21.53■■□□□ 1.04
MBD3-206ENST00000589901 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
MBD3-206ENST00000589901 MAPK8IP3Q9UPT6 1336 aa21.53■■□□□ 1.04
MBD3-206ENST00000589901 FER1L6Q2WGJ9 1857 aa21.52■■□□□ 1.04
MBD3-206ENST00000589901 SOGA3Q5TF21 947 aa21.52■■□□□ 1.04
MBD3-206ENST00000589901 KLRG1Q96E93 195 aa21.52■■□□□ 1.04
MBD3-206ENST00000589901 CCDC88AQ3V6T2 1871 aa21.52■■□□□ 1.03
MBD3-206ENST00000589901 OLFM4Q6UX06 510 aa21.51■■□□□ 1.03
MBD3-206ENST00000589901 TTLL7Q6ZT98 887 aa21.51■■□□□ 1.03
MBD3-206ENST00000589901 PNNQ9H307 717 aaKnown RBP21.51■■□□□ 1.03
MBD3-206ENST00000589901 MYL6BP14649 208 aa21.5■■□□□ 1.03
MBD3-206ENST00000589901 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
MBD3-206ENST00000589901 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
MBD3-206ENST00000589901 DLG5Q8TDM6 1919 aa21.5■■□□□ 1.03
MBD3-206ENST00000589901 PCNTO95613 3336 aa21.49■■□□□ 1.03
MBD3-206ENST00000589901 LAMB4A4D0S4 1761 aa21.49■■□□□ 1.03
MBD3-206ENST00000589901 KDM3BQ7LBC6 1761 aa21.49■■□□□ 1.03
MBD3-206ENST00000589901 ERVV-1B6SEH8 477 aa21.49■■□□□ 1.03
MBD3-206ENST00000589901 DDNO94850 711 aaPredicted RBP21.49■■□□□ 1.03
MBD3-206ENST00000589901 MAP3K15Q6ZN16 1313 aa21.49■■□□□ 1.03
MBD3-206ENST00000589901 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
MBD3-206ENST00000589901 KIF6Q6ZMV9 814 aa21.47■■□□□ 1.03
MBD3-206ENST00000589901 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
MBD3-206ENST00000589901 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
MBD3-206ENST00000589901 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
MBD3-206ENST00000589901 ABCC12Q96J65 1359 aa21.47■■□□□ 1.03
MBD3-206ENST00000589901 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
MBD3-206ENST00000589901 GPTP24298 496 aa21.46■■□□□ 1.03
MBD3-206ENST00000589901 RIPK4P57078 832 aa21.46■■□□□ 1.03
MBD3-206ENST00000589901 RALBP1Q15311 655 aa21.46■■□□□ 1.03
MBD3-206ENST00000589901 JMYQ8N9B5 988 aa21.46■■□□□ 1.03
MBD3-206ENST00000589901 ZNF277Q9NRM2 450 aaPredicted RBP21.46■■□□□ 1.03
MBD3-206ENST00000589901 ALDH1B1P30837 517 aa21.45■■□□□ 1.02
MBD3-206ENST00000589901 FKBP4Q02790 459 aaKnown RBP eCLIP21.45■■□□□ 1.02
MBD3-206ENST00000589901 NYXQ9GZU5 481 aa21.45■■□□□ 1.02
MBD3-206ENST00000589901 UBN2Q6ZU65 1347 aa21.45■■□□□ 1.02
MBD3-206ENST00000589901 POTEIP0CG38 1075 aa21.44■■□□□ 1.02
MBD3-206ENST00000589901 POTEJP0CG39 1038 aa21.44■■□□□ 1.02
MBD3-206ENST00000589901 CRY2Q49AN0 593 aa21.44■■□□□ 1.02
MBD3-206ENST00000589901 DICER1Q9UPY3 1922 aaKnown RBP21.44■■□□□ 1.02
MBD3-206ENST00000589901 SUSD4Q5VX71 490 aa21.43■■□□□ 1.02
MBD3-206ENST00000589901 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
MBD3-206ENST00000589901 EIF2S2P20042 333 aaKnown RBP21.42■■□□□ 1.02
MBD3-206ENST00000589901 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
MBD3-206ENST00000589901 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
MBD3-206ENST00000589901 ERBB4Q15303 1308 aa21.42■■□□□ 1.02
MBD3-206ENST00000589901 ZNF541Q9H0D2 1346 aa21.41■■□□□ 1.02
MBD3-206ENST00000589901 PDIA6Q15084 440 aa21.41■■□□□ 1.02
MBD3-206ENST00000589901 CHADLQ6NUI6 762 aa21.41■■□□□ 1.02
MBD3-206ENST00000589901 LRP10Q7Z4F1 713 aa21.41■■□□□ 1.02
MBD3-206ENST00000589901 ZNF34Q8IZ26 560 aa21.41■■□□□ 1.02
MBD3-206ENST00000589901 ANXA1P04083 346 aa21.4■■□□□ 1.02
MBD3-206ENST00000589901 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
MBD3-206ENST00000589901 GIGYF2Q6Y7W6 1299 aaKnown RBP21.4■■□□□ 1.02
MBD3-206ENST00000589901 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
MBD3-206ENST00000589901 SYNE4Q8N205 404 aa21.4■■□□□ 1.02
MBD3-206ENST00000589901 L3MBTL3Q96JM7 780 aaPredicted RBP21.4■■□□□ 1.02
MBD3-206ENST00000589901 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.02
MBD3-206ENST00000589901 NTSR2O95665 410 aa21.39■■□□□ 1.01
MBD3-206ENST00000589901 RPGRQ92834 1020 aaKnown RBP21.39■■□□□ 1.01
MBD3-206ENST00000589901 IQCA1LA6NCM1 817 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 IARSP41252 1262 aaKnown RBP21.38■■□□□ 1.01
MBD3-206ENST00000589901 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 C3orf67Q6ZVT6 689 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 TAF1DQ9H5J8 278 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms