RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 NEFMP07197 916 aa18.24■□□□□ 0.51
HDAC5-208ENST00000588419 BRIP1Q9BX63 1249 aa18.24■□□□□ 0.51
HDAC5-208ENST00000588419 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
HDAC5-208ENST00000588419 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
HDAC5-208ENST00000588419 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
HDAC5-208ENST00000588419 FSTL1Q12841 308 aa18.22■□□□□ 0.51
HDAC5-208ENST00000588419 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
HDAC5-208ENST00000588419 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
HDAC5-208ENST00000588419 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
HDAC5-208ENST00000588419 GLTPD2A6NH11 291 aa18.21■□□□□ 0.51
HDAC5-208ENST00000588419 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
HDAC5-208ENST00000588419 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
HDAC5-208ENST00000588419 PDZRN3Q9UPQ7 1066 aa18.21■□□□□ 0.51
HDAC5-208ENST00000588419 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
HDAC5-208ENST00000588419 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
HDAC5-208ENST00000588419 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
HDAC5-208ENST00000588419 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
HDAC5-208ENST00000588419 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
HDAC5-208ENST00000588419 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDAC5-208ENST00000588419 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-208ENST00000588419 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-208ENST00000588419 MASTLQ96GX5 879 aa18.18■□□□□ 0.5
HDAC5-208ENST00000588419 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 HTATSF1O43719 755 aaKnown RBP18.17■□□□□ 0.5
HDAC5-208ENST00000588419 SRGNP10124 158 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 STYK1Q6J9G0 422 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
HDAC5-208ENST00000588419 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 DNAJC5GQ8N7S2 189 aa18.17■□□□□ 0.5
HDAC5-208ENST00000588419 KLRG1Q96E93 195 aa18.16■□□□□ 0.5
HDAC5-208ENST00000588419 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
HDAC5-208ENST00000588419 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
HDAC5-208ENST00000588419 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
HDAC5-208ENST00000588419 CLEC4GQ6UXB4 293 aa18.15■□□□□ 0.5
HDAC5-208ENST00000588419 HLFQ16534 295 aa18.14■□□□□ 0.49
HDAC5-208ENST00000588419 MYL6BP14649 208 aa18.13■□□□□ 0.49
HDAC5-208ENST00000588419 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
HDAC5-208ENST00000588419 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
HDAC5-208ENST00000588419 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
HDAC5-208ENST00000588419 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
HDAC5-208ENST00000588419 SCN4AP35499 1836 aa18.12■□□□□ 0.49
HDAC5-208ENST00000588419 NPR1P16066 1061 aa18.12■□□□□ 0.49
HDAC5-208ENST00000588419 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
HDAC5-208ENST00000588419 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
HDAC5-208ENST00000588419 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
HDAC5-208ENST00000588419 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
HDAC5-208ENST00000588419 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
HDAC5-208ENST00000588419 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
HDAC5-208ENST00000588419 ANKRD36CQ5JPF3 1778 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 ABCC12Q96J65 1359 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 POTECB2RU33 542 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 PLEKHF1Q96S99 279 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
HDAC5-208ENST00000588419 GPTP24298 496 aa18.09■□□□□ 0.49
HDAC5-208ENST00000588419 ZNF277Q9NRM2 450 aaPredicted RBP18.09■□□□□ 0.49
HDAC5-208ENST00000588419 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
HDAC5-208ENST00000588419 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
HDAC5-208ENST00000588419 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
HDAC5-208ENST00000588419 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
HDAC5-208ENST00000588419 LAMB2P55268 1798 aa18.07■□□□□ 0.48
HDAC5-208ENST00000588419 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
HDAC5-208ENST00000588419 POTEJP0CG39 1038 aa18.07■□□□□ 0.48
HDAC5-208ENST00000588419 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC5-208ENST00000588419 NYXQ9GZU5 481 aa18.07■□□□□ 0.48
HDAC5-208ENST00000588419 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
HDAC5-208ENST00000588419 ZNF541Q9H0D2 1346 aa18.06■□□□□ 0.48
HDAC5-208ENST00000588419 RGL2O15211 777 aa18.05■□□□□ 0.48
HDAC5-208ENST00000588419 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
HDAC5-208ENST00000588419 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
HDAC5-208ENST00000588419 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
HDAC5-208ENST00000588419 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
HDAC5-208ENST00000588419 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
HDAC5-208ENST00000588419 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
HDAC5-208ENST00000588419 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
HDAC5-208ENST00000588419 ALDH1B1P30837 517 aa18.04■□□□□ 0.48
HDAC5-208ENST00000588419 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-208ENST00000588419 KLRG2A4D1S0 409 aaPredicted RBP18.03■□□□□ 0.48
HDAC5-208ENST00000588419 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
HDAC5-208ENST00000588419 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
HDAC5-208ENST00000588419 IARSP41252 1262 aaKnown RBP18.03■□□□□ 0.48
HDAC5-208ENST00000588419 RIPK4P57078 832 aa18.03■□□□□ 0.48
HDAC5-208ENST00000588419 RTKN2Q8IZC4 609 aa18.03■□□□□ 0.48
HDAC5-208ENST00000588419 NECTIN2Q92692 538 aa18.03■□□□□ 0.48
HDAC5-208ENST00000588419 ANXA1P04083 346 aa18.02■□□□□ 0.48
HDAC5-208ENST00000588419 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.48
HDAC5-208ENST00000588419 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
HDAC5-208ENST00000588419 HSPA1AP0DMV8 641 aaKnown RBP18.01■□□□□ 0.47
HDAC5-208ENST00000588419 HSPA1BP0DMV9 641 aaKnown RBP18.01■□□□□ 0.47
HDAC5-208ENST00000588419 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
HDAC5-208ENST00000588419 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
HDAC5-208ENST00000588419 MKRN1Q9UHC7 482 aaKnown RBP18.01■□□□□ 0.47
HDAC5-208ENST00000588419 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
HDAC5-208ENST00000588419 TAF1P21675 1872 aa18.01■□□□□ 0.47
HDAC5-208ENST00000588419 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
HDAC5-208ENST00000588419 COL13A1Q5TAT6 717 aaPredicted RBP18■□□□□ 0.47
HDAC5-208ENST00000588419 SLC51AQ86UW1 340 aa18■□□□□ 0.47
HDAC5-208ENST00000588419 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
HDAC5-208ENST00000588419 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms