RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
HDAC5-203ENST00000586339 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
HDAC5-203ENST00000586339 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
HDAC5-203ENST00000586339 RALBP1Q15311 655 aa18.61■□□□□ 0.57
HDAC5-203ENST00000586339 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
HDAC5-203ENST00000586339 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-203ENST00000586339 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
HDAC5-203ENST00000586339 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
HDAC5-203ENST00000586339 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
HDAC5-203ENST00000586339 ZNF622Q969S3 477 aaKnown RBP eCLIP18.6■□□□□ 0.57
HDAC5-203ENST00000586339 WDR90Q96KV7 1748 aa18.6■□□□□ 0.57
HDAC5-203ENST00000586339 NFKBIEO00221 500 aa18.59■□□□□ 0.57
HDAC5-203ENST00000586339 APLP1P51693 650 aa18.59■□□□□ 0.57
HDAC5-203ENST00000586339 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
HDAC5-203ENST00000586339 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
HDAC5-203ENST00000586339 LTBP3Q9NS15 1303 aa18.58■□□□□ 0.57
HDAC5-203ENST00000586339 SRGNP10124 158 aa18.58■□□□□ 0.56
HDAC5-203ENST00000586339 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
HDAC5-203ENST00000586339 PRELPP51888 382 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 FSTL1Q12841 308 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 SOGA3Q5TF21 947 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 CCDC24Q8N4L8 307 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
HDAC5-203ENST00000586339 GLTPD2A6NH11 291 aa18.56■□□□□ 0.56
HDAC5-203ENST00000586339 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
HDAC5-203ENST00000586339 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC5-203ENST00000586339 C21orf2O43822 256 aa18.55■□□□□ 0.56
HDAC5-203ENST00000586339 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
HDAC5-203ENST00000586339 TPTE2Q6XPS3 522 aa18.55■□□□□ 0.56
HDAC5-203ENST00000586339 RRAGCQ9HB90 399 aa18.55■□□□□ 0.56
HDAC5-203ENST00000586339 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
HDAC5-203ENST00000586339 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
HDAC5-203ENST00000586339 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
HDAC5-203ENST00000586339 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
HDAC5-203ENST00000586339 TAOK3Q9H2K8 898 aa18.54■□□□□ 0.56
HDAC5-203ENST00000586339 NPR1P16066 1061 aa18.53■□□□□ 0.56
HDAC5-203ENST00000586339 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
HDAC5-203ENST00000586339 IBTKQ9P2D0 1353 aaPredicted RBP18.53■□□□□ 0.56
HDAC5-203ENST00000586339 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
HDAC5-203ENST00000586339 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
HDAC5-203ENST00000586339 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
HDAC5-203ENST00000586339 VEGFAP15692 232 aaPredicted RBP18.52■□□□□ 0.56
HDAC5-203ENST00000586339 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.56
HDAC5-203ENST00000586339 HLFQ16534 295 aa18.51■□□□□ 0.55
HDAC5-203ENST00000586339 DPY19L2Q6NUT2 758 aa18.51■□□□□ 0.55
HDAC5-203ENST00000586339 KIF6Q6ZMV9 814 aa18.51■□□□□ 0.55
HDAC5-203ENST00000586339 SMC1BQ8NDV3 1235 aa18.51■□□□□ 0.55
HDAC5-203ENST00000586339 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
HDAC5-203ENST00000586339 RIPK4P57078 832 aa18.5■□□□□ 0.55
HDAC5-203ENST00000586339 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
HDAC5-203ENST00000586339 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
HDAC5-203ENST00000586339 TSPYL4Q9UJ04 414 aa18.5■□□□□ 0.55
HDAC5-203ENST00000586339 ANKRD36CQ5JPF3 1778 aa18.5■□□□□ 0.55
HDAC5-203ENST00000586339 SCN4AP35499 1836 aa18.49■□□□□ 0.55
HDAC5-203ENST00000586339 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
HDAC5-203ENST00000586339 C7orf43Q8WVR3 580 aa18.49■□□□□ 0.55
HDAC5-203ENST00000586339 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
HDAC5-203ENST00000586339 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
HDAC5-203ENST00000586339 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
HDAC5-203ENST00000586339 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
HDAC5-203ENST00000586339 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 CRY2Q49AN0 593 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 TTLL7Q6ZT98 887 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 DNAJC5GQ8N7S2 189 aa18.47■□□□□ 0.55
HDAC5-203ENST00000586339 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
HDAC5-203ENST00000586339 MYL6BP14649 208 aa18.46■□□□□ 0.55
HDAC5-203ENST00000586339 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC5-203ENST00000586339 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
HDAC5-203ENST00000586339 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
HDAC5-203ENST00000586339 RTKN2Q8IZC4 609 aa18.44■□□□□ 0.54
HDAC5-203ENST00000586339 ZBTB3Q9H5J0 574 aa18.44■□□□□ 0.54
HDAC5-203ENST00000586339 UBN2Q6ZU65 1347 aa18.44■□□□□ 0.54
HDAC5-203ENST00000586339 SNED1Q8TER0 1413 aa18.43■□□□□ 0.54
HDAC5-203ENST00000586339 POTECB2RU33 542 aa18.43■□□□□ 0.54
HDAC5-203ENST00000586339 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
HDAC5-203ENST00000586339 ZNF34Q8IZ26 560 aa18.43■□□□□ 0.54
HDAC5-203ENST00000586339 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
HDAC5-203ENST00000586339 PCNTO95613 3336 aa18.43■□□□□ 0.54
HDAC5-203ENST00000586339 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
HDAC5-203ENST00000586339 CC2D2BQ6DHV5 1058 aa18.42■□□□□ 0.54
HDAC5-203ENST00000586339 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
HDAC5-203ENST00000586339 LAMB2P55268 1798 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 GPTP24298 496 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-203ENST00000586339 PDIA6Q15084 440 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 PPP1R42Q7Z4L9 355 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-203ENST00000586339 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
HDAC5-203ENST00000586339 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
HDAC5-203ENST00000586339 NTSR2O95665 410 aa18.4■□□□□ 0.54
HDAC5-203ENST00000586339 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
HDAC5-203ENST00000586339 GRIPAP1Q4V328 841 aa18.4■□□□□ 0.54
HDAC5-203ENST00000586339 SUSD4Q5VX71 490 aa18.4■□□□□ 0.54
HDAC5-203ENST00000586339 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
HDAC5-203ENST00000586339 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
HDAC5-203ENST00000586339 CHL1O00533 1208 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms