RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
CASC3-209ENST00000583902 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
CASC3-209ENST00000583902 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
CASC3-209ENST00000583902 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
CASC3-209ENST00000583902 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 GNAI3P08754 354 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 SLC4A9Q96Q91 983 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
CASC3-209ENST00000583902 PI4KAP2A4QPH2 592 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 TRIM37O94972 964 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 A1BGP04217 495 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
CASC3-209ENST00000583902 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 TRIM28Q13263 835 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 SF3B2Q13435 895 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 PI4KAP1Q8N8J0 262 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 PANK1Q8TE04 598 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 XAGE3Q8WTP9 111 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 PHAXQ9H814 394 aaKnown RBP11.61□□□□□ -0.55
CASC3-209ENST00000583902 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
CASC3-209ENST00000583902 MYH14Q7Z406 1995 aaKnown RBP11.6□□□□□ -0.55
CASC3-209ENST00000583902 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
CASC3-209ENST00000583902 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
CASC3-209ENST00000583902 G2E3Q7L622 706 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 CRBNQ96SW2 442 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 ZNF652Q9Y2D9 606 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
CASC3-209ENST00000583902 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
CASC3-209ENST00000583902 ADCY9O60503 1353 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 ZBTB7BO15156 539 aaPredicted RBP11.59□□□□□ -0.55
CASC3-209ENST00000583902 RPS6KA4O75676 772 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 RLBP1P12271 317 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 MYL6BP14649 208 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 ITPK1Q13572 414 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 C20orf194Q5TEA3 1177 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
CASC3-209ENST00000583902 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 MAP3K2Q9Y2U5 619 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 MAP3K15Q6ZN16 1313 aa11.59□□□□□ -0.55
CASC3-209ENST00000583902 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 COL15A1P39059 1388 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 APBA3O96018 575 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 BAG6P46379 1132 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
CASC3-209ENST00000583902 RPAP2Q8IXW5 612 aaPredicted RBP11.58□□□□□ -0.56
CASC3-209ENST00000583902 CCDC191Q8NCU4 936 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 ZBTB1Q9Y2K1 713 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 RTCBQ9Y3I0 505 aaKnown RBP11.58□□□□□ -0.56
CASC3-209ENST00000583902 UTYO14607 1347 aa11.58□□□□□ -0.56
CASC3-209ENST00000583902 AIMP1Q12904 312 aaKnown RBP11.57□□□□□ -0.56
CASC3-209ENST00000583902 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
CASC3-209ENST00000583902 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
CASC3-209ENST00000583902 LINC00116Q8NCU8 138 aa11.57□□□□□ -0.56
CASC3-209ENST00000583902 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
CASC3-209ENST00000583902 NUP98P52948 1817 aa11.57□□□□□ -0.56
CASC3-209ENST00000583902 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 F6X3S4 739 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 HMMRO75330 724 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 GNAI2P04899 355 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 SSFA2P28290 1259 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
CASC3-209ENST00000583902 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 AK7Q96M32 723 aa11.56□□□□□ -0.56
CASC3-209ENST00000583902 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
CASC3-209ENST00000583902 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
CASC3-209ENST00000583902 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 ANXA1P04083 346 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 UBTFL1P0CB47 393 aaPredicted RBP11.55□□□□□ -0.56
CASC3-209ENST00000583902 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
CASC3-209ENST00000583902 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 UBR3Q6ZT12 1888 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
CASC3-209ENST00000583902 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
CASC3-209ENST00000583902 ZPR1O75312 459 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms