RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 KIF6Q6ZMV9 814 aa23.52■■□□□ 1.36
LIMD2-211ENST00000583211 CHPF2Q9P2E5 772 aa23.52■■□□□ 1.36
LIMD2-211ENST00000583211 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
LIMD2-211ENST00000583211 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
LIMD2-211ENST00000583211 SYT17Q9BSW7 474 aa23.51■■□□□ 1.35
LIMD2-211ENST00000583211 CD2APQ9Y5K6 639 aa23.51■■□□□ 1.35
LIMD2-211ENST00000583211 E9PSI1 815 aa23.5■■□□□ 1.35
LIMD2-211ENST00000583211 POLRMTO00411 1230 aaKnown RBP23.5■■□□□ 1.35
LIMD2-211ENST00000583211 DDR1Q08345 913 aa23.5■■□□□ 1.35
LIMD2-211ENST00000583211 CCDC30Q5VVM6 783 aa23.5■■□□□ 1.35
LIMD2-211ENST00000583211 MAP3K15Q6ZN16 1313 aa23.5■■□□□ 1.35
LIMD2-211ENST00000583211 ANXA1P04083 346 aa23.49■■□□□ 1.35
LIMD2-211ENST00000583211 TTLL7Q6ZT98 887 aa23.49■■□□□ 1.35
LIMD2-211ENST00000583211 HYPKQ9NX55 129 aa23.49■■□□□ 1.35
LIMD2-211ENST00000583211 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
LIMD2-211ENST00000583211 C10orf71Q711Q0 1435 aa23.49■■□□□ 1.35
LIMD2-211ENST00000583211 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
LIMD2-211ENST00000583211 KLHL34Q8N239 644 aa23.48■■□□□ 1.35
LIMD2-211ENST00000583211 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
LIMD2-211ENST00000583211 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
LIMD2-211ENST00000583211 EXOSC9Q06265 439 aaKnown RBP23.47■■□□□ 1.35
LIMD2-211ENST00000583211 SETDB2Q96T68 719 aa23.47■■□□□ 1.35
LIMD2-211ENST00000583211 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
LIMD2-211ENST00000583211 BICDL1Q6ZP65 573 aa23.46■■□□□ 1.35
LIMD2-211ENST00000583211 COPS6Q7L5N1 327 aa23.46■■□□□ 1.35
LIMD2-211ENST00000583211 XAGE3Q8WTP9 111 aa23.46■■□□□ 1.35
LIMD2-211ENST00000583211 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
LIMD2-211ENST00000583211 N4BP2Q86UW6 1770 aaPredicted RBP23.45■■□□□ 1.34
LIMD2-211ENST00000583211 HLFQ16534 295 aa23.45■■□□□ 1.34
LIMD2-211ENST00000583211 VAMP4O75379 141 aa23.44■■□□□ 1.34
LIMD2-211ENST00000583211 SERPINB2P05120 415 aa23.44■■□□□ 1.34
LIMD2-211ENST00000583211 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
LIMD2-211ENST00000583211 ZBTB3Q9H5J0 574 aa23.44■■□□□ 1.34
LIMD2-211ENST00000583211 BRCA1P38398 1863 aaKnown RBP23.44■■□□□ 1.34
LIMD2-211ENST00000583211 ANKRD31Q8N7Z5 1873 aa23.43■■□□□ 1.34
LIMD2-211ENST00000583211 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
LIMD2-211ENST00000583211 AIMP1Q12904 312 aaKnown RBP23.43■■□□□ 1.34
LIMD2-211ENST00000583211 GIGYF2Q6Y7W6 1299 aaKnown RBP23.43■■□□□ 1.34
LIMD2-211ENST00000583211 NIP7Q9Y221 180 aaKnown RBP eCLIP23.42■■□□□ 1.34
LIMD2-211ENST00000583211 DLEC1Q9Y238 1755 aa23.42■■□□□ 1.34
LIMD2-211ENST00000583211 TRMT2AQ8IZ69 625 aaKnown RBP23.41■■□□□ 1.34
LIMD2-211ENST00000583211 TGFB2P61812 414 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 HSP90AB3PQ58FF7 597 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 ANKRD13DQ6ZTN6 518 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 PLBD2Q8NHP8 589 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 CDCA7LQ96GN5 454 aa23.4■■□□□ 1.34
LIMD2-211ENST00000583211 ZNF34Q8IZ26 560 aa23.39■■□□□ 1.33
LIMD2-211ENST00000583211 IBTKQ9P2D0 1353 aaPredicted RBP23.39■■□□□ 1.33
LIMD2-211ENST00000583211 PXDNLA1KZ92 1463 aa23.38■■□□□ 1.33
LIMD2-211ENST00000583211 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
LIMD2-211ENST00000583211 PHAXQ9H814 394 aaKnown RBP23.38■■□□□ 1.33
LIMD2-211ENST00000583211 PRR5LQ6MZQ0 368 aa23.37■■□□□ 1.33
LIMD2-211ENST00000583211 NBPF5PQ86XG9 351 aaPredicted RBP23.37■■□□□ 1.33
LIMD2-211ENST00000583211 DDX58O95786 925 aaKnown RBP23.36■■□□□ 1.33
LIMD2-211ENST00000583211 SLC4A2P04920 1241 aa23.36■■□□□ 1.33
LIMD2-211ENST00000583211 PARP10Q53GL7 1025 aa23.36■■□□□ 1.33
LIMD2-211ENST00000583211 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
LIMD2-211ENST00000583211 NYXQ9GZU5 481 aa23.36■■□□□ 1.33
LIMD2-211ENST00000583211 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
LIMD2-211ENST00000583211 NPHP1O15259 732 aa23.35■■□□□ 1.33
LIMD2-211ENST00000583211 ST5P78524 1137 aa23.35■■□□□ 1.33
LIMD2-211ENST00000583211 TCIRG1Q13488 830 aa23.35■■□□□ 1.33
LIMD2-211ENST00000583211 ZNF428Q96B54 188 aa23.35■■□□□ 1.33
LIMD2-211ENST00000583211 UBN2Q6ZU65 1347 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 ARFGEF1Q9Y6D6 1849 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 DCAF8L1A6NGE4 600 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
LIMD2-211ENST00000583211 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
LIMD2-211ENST00000583211 GPTP24298 496 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 RIC3Q7Z5B4 369 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 BRIP1Q9BX63 1249 aa23.34■■□□□ 1.33
LIMD2-211ENST00000583211 COL11A2P13942 1736 aaPredicted RBP23.33■■□□□ 1.33
LIMD2-211ENST00000583211 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.33
LIMD2-211ENST00000583211 PDE6BP35913 854 aa23.32■■□□□ 1.32
LIMD2-211ENST00000583211 PPP1R42Q7Z4L9 355 aa23.32■■□□□ 1.32
LIMD2-211ENST00000583211 FLIIQ13045 1269 aa23.31■■□□□ 1.32
LIMD2-211ENST00000583211 KSR2Q6VAB6 950 aa23.31■■□□□ 1.32
LIMD2-211ENST00000583211 RIC1Q4ADV7 1423 aa23.31■■□□□ 1.32
LIMD2-211ENST00000583211 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
LIMD2-211ENST00000583211 A0A0G2JLW4 131 aa23.3■■□□□ 1.32
LIMD2-211ENST00000583211 DPEP1P16444 411 aa23.3■■□□□ 1.32
LIMD2-211ENST00000583211 GTF2E1P29083 439 aaPredicted RBP23.3■■□□□ 1.32
LIMD2-211ENST00000583211 SUSD4Q5VX71 490 aa23.3■■□□□ 1.32
LIMD2-211ENST00000583211 G2E3Q7L622 706 aa23.3■■□□□ 1.32
LIMD2-211ENST00000583211 ISCA1Q9BUE6 129 aa23.3■■□□□ 1.32
LIMD2-211ENST00000583211 TNRC6CQ9HCJ0 1690 aaKnown RBP23.29■■□□□ 1.32
LIMD2-211ENST00000583211 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 NTSR2O95665 410 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 TRIM28Q13263 835 aaKnown RBP23.29■■□□□ 1.32
LIMD2-211ENST00000583211 CACNA1SQ13698 1873 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 NLRP10Q86W26 655 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 UTP14AQ9BVJ6 771 aaKnown RBP23.29■■□□□ 1.32
LIMD2-211ENST00000583211 CHD4Q14839 1912 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 LAMB2P55268 1798 aa23.29■■□□□ 1.32
LIMD2-211ENST00000583211 ADCY9O60503 1353 aa23.28■■□□□ 1.32
LIMD2-211ENST00000583211 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
LIMD2-211ENST00000583211 KCNA3P22001 575 aa23.28■■□□□ 1.32
LIMD2-211ENST00000583211 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
LIMD2-211ENST00000583211 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms