RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 PELP1Q8IZL8 1130 aaKnown RBP26.79■■□□□ 1.88
PPP4R1-221ENST00000582240 XAGE3Q8WTP9 111 aa26.79■■□□□ 1.88
PPP4R1-221ENST00000582240 FANCIQ9NVI1 1328 aa26.79■■□□□ 1.88
PPP4R1-221ENST00000582240 KIF6Q6ZMV9 814 aa26.78■■□□□ 1.88
PPP4R1-221ENST00000582240 COPS6Q7L5N1 327 aa26.78■■□□□ 1.88
PPP4R1-221ENST00000582240 DDX21Q9NR30 783 aaKnown RBP eCLIP26.78■■□□□ 1.88
PPP4R1-221ENST00000582240 MAP3K15Q6ZN16 1313 aa26.77■■□□□ 1.88
PPP4R1-221ENST00000582240 SCN7AQ01118 1682 aa26.76■■□□□ 1.87
PPP4R1-221ENST00000582240 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
PPP4R1-221ENST00000582240 FAM177BA6PVY3 158 aa26.76■■□□□ 1.87
PPP4R1-221ENST00000582240 SETDB2Q96T68 719 aa26.76■■□□□ 1.87
PPP4R1-221ENST00000582240 A0A0G2JLW4 131 aa26.75■■□□□ 1.87
PPP4R1-221ENST00000582240 EXOSC9Q06265 439 aaKnown RBP26.75■■□□□ 1.87
PPP4R1-221ENST00000582240 ZNF652Q9Y2D9 606 aa26.75■■□□□ 1.87
PPP4R1-221ENST00000582240 C10orf71Q711Q0 1435 aa26.74■■□□□ 1.87
PPP4R1-221ENST00000582240 CLEC4GQ6UXB4 293 aa26.74■■□□□ 1.87
PPP4R1-221ENST00000582240 NIP7Q9Y221 180 aaKnown RBP eCLIP26.74■■□□□ 1.87
PPP4R1-221ENST00000582240 ERVV-1B6SEH8 477 aa26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 DPEP1P16444 411 aa26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 GOLGA2Q08379 1002 aa26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 TWISTNBQ3B726 338 aaPredicted RBP26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 DBF4Q9UBU7 674 aaPredicted RBP26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 BCORQ6W2J9 1755 aa26.73■■□□□ 1.87
PPP4R1-221ENST00000582240 GPTP24298 496 aa26.72■■□□□ 1.87
PPP4R1-221ENST00000582240 GPR162Q16538 588 aa26.72■■□□□ 1.87
PPP4R1-221ENST00000582240 PHAXQ9H814 394 aaKnown RBP26.72■■□□□ 1.87
PPP4R1-221ENST00000582240 CHRNA5P30532 468 aa26.71■■□□□ 1.87
PPP4R1-221ENST00000582240 PRR5LQ6MZQ0 368 aa26.71■■□□□ 1.87
PPP4R1-221ENST00000582240 CARMIL3Q8ND23 1372 aa26.71■■□□□ 1.87
PPP4R1-221ENST00000582240 DCAF8L1A6NGE4 600 aa26.7■■□□□ 1.86
PPP4R1-221ENST00000582240 CDCA7LQ96GN5 454 aa26.7■■□□□ 1.86
PPP4R1-221ENST00000582240 MYH16Q9H6N6 1097 aa26.7■■□□□ 1.86
PPP4R1-221ENST00000582240 YBX3P16989 372 aaKnown RBP eCLIP26.69■■□□□ 1.86
PPP4R1-221ENST00000582240 CCDC30Q5VVM6 783 aa26.69■■□□□ 1.86
PPP4R1-221ENST00000582240 ZNF428Q96B54 188 aa26.69■■□□□ 1.86
PPP4R1-221ENST00000582240 HYPKQ9NX55 129 aa26.69■■□□□ 1.86
PPP4R1-221ENST00000582240 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
PPP4R1-221ENST00000582240 NPHP1O15259 732 aa26.68■■□□□ 1.86
PPP4R1-221ENST00000582240 TGFB2P61812 414 aa26.68■■□□□ 1.86
PPP4R1-221ENST00000582240 GIGYF2Q6Y7W6 1299 aaKnown RBP26.68■■□□□ 1.86
PPP4R1-221ENST00000582240 NBPF5PQ86XG9 351 aaPredicted RBP26.68■■□□□ 1.86
PPP4R1-221ENST00000582240 AFDNP55196 1824 aaKnown RBP26.67■■□□□ 1.86
PPP4R1-221ENST00000582240 VAMP4O75379 141 aa26.67■■□□□ 1.86
PPP4R1-221ENST00000582240 KCNA3P22001 575 aa26.66■■□□□ 1.86
PPP4R1-221ENST00000582240 ZNF34Q8IZ26 560 aa26.66■■□□□ 1.86
PPP4R1-221ENST00000582240 CNBD1Q8NA66 436 aa26.66■■□□□ 1.86
PPP4R1-221ENST00000582240 UBN2Q6ZU65 1347 aa26.65■■□□□ 1.86
PPP4R1-221ENST00000582240 RGL2O15211 777 aa26.65■■□□□ 1.86
PPP4R1-221ENST00000582240 SLFN5Q08AF3 891 aa26.64■■□□□ 1.86
PPP4R1-221ENST00000582240 SUSD4Q5VX71 490 aa26.64■■□□□ 1.86
PPP4R1-221ENST00000582240 ANKRD13DQ6ZTN6 518 aa26.64■■□□□ 1.86
PPP4R1-221ENST00000582240 G2E3Q7L622 706 aa26.64■■□□□ 1.86
PPP4R1-221ENST00000582240 NRXN2Q9P2S2 1712 aa26.64■■□□□ 1.85
PPP4R1-221ENST00000582240 N4BP2Q86UW6 1770 aaPredicted RBP26.63■■□□□ 1.85
PPP4R1-221ENST00000582240 NUTM1Q86Y26 1132 aa26.63■■□□□ 1.85
PPP4R1-221ENST00000582240 C2CD5Q86YS7 1000 aa26.63■■□□□ 1.85
PPP4R1-221ENST00000582240 PLBD2Q8NHP8 589 aa26.63■■□□□ 1.85
PPP4R1-221ENST00000582240 KIF13BQ9NQT8 1826 aa26.62■■□□□ 1.85
PPP4R1-221ENST00000582240 KIAA1551Q9HCM1 1747 aa26.62■■□□□ 1.85
PPP4R1-221ENST00000582240 STK31Q9BXU1 1019 aa26.62■■□□□ 1.85
PPP4R1-221ENST00000582240 BCS1LQ9Y276 419 aa26.62■■□□□ 1.85
PPP4R1-221ENST00000582240 NUP98P52948 1817 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 E9PSI1 815 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 SLC4A2P04920 1241 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 ST5P78524 1137 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 TCIRG1Q13488 830 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 TPTE2Q6XPS3 522 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 ATP10DQ9P241 1426 aa26.61■■□□□ 1.85
PPP4R1-221ENST00000582240 ATP5J2-PTCD1G3V325 749 aa26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 GTF2E1P29083 439 aaPredicted RBP26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 HNRNPUQ00839 825 aaKnown RBP eCLIP26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 ERFEQ4G0M1 354 aa26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 RIC3Q7Z5B4 369 aa26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 BRIP1Q9BX63 1249 aa26.6■■□□□ 1.85
PPP4R1-221ENST00000582240 CHMP4AQ9BY43 222 aa26.58■■□□□ 1.85
PPP4R1-221ENST00000582240 PIM2Q9P1W9 311 aa26.58■■□□□ 1.85
PPP4R1-221ENST00000582240 H0YIN7 160 aa26.57■■□□□ 1.84
PPP4R1-221ENST00000582240 HSP90AB3PQ58FF7 597 aa26.57■■□□□ 1.84
PPP4R1-221ENST00000582240 NLRP10Q86W26 655 aa26.57■■□□□ 1.84
PPP4R1-221ENST00000582240 NTSR2O95665 410 aa26.56■■□□□ 1.84
PPP4R1-221ENST00000582240 PDE6BP35913 854 aa26.56■■□□□ 1.84
PPP4R1-221ENST00000582240 SYNE4Q8N205 404 aa26.56■■□□□ 1.84
PPP4R1-221ENST00000582240 ZNF622Q969S3 477 aaKnown RBP eCLIP26.56■■□□□ 1.843e-8■□□□□ 10.5
PPP4R1-221ENST00000582240 NYXQ9GZU5 481 aa26.56■■□□□ 1.84
PPP4R1-221ENST00000582240 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
PPP4R1-221ENST00000582240 PARP10Q53GL7 1025 aa26.55■■□□□ 1.84
PPP4R1-221ENST00000582240 MYD88Q99836 296 aa26.55■■□□□ 1.84
PPP4R1-221ENST00000582240 UTP14AQ9BVJ6 771 aaKnown RBP26.55■■□□□ 1.84
PPP4R1-221ENST00000582240 ANKRD31Q8N7Z5 1873 aa26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 DALRD3Q5D0E6 543 aaKnown RBP26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 PPP1R42Q7Z4L9 355 aa26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 TRMT2AQ8IZ69 625 aaKnown RBP26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 ISCA1Q9BUE6 129 aa26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 MAP3K2Q9Y2U5 619 aa26.54■■□□□ 1.84
PPP4R1-221ENST00000582240 PI4KAP2A4QPH2 592 aa26.52■■□□□ 1.84
PPP4R1-221ENST00000582240 GRIN3BO60391 1043 aa26.52■■□□□ 1.84
PPP4R1-221ENST00000582240 DDX58O95786 925 aaKnown RBP26.52■■□□□ 1.84
PPP4R1-221ENST00000582240 PI4KAP1Q8N8J0 262 aa26.52■■□□□ 1.84
PPP4R1-221ENST00000582240 ZNF219Q9P2Y4 722 aaPredicted RBP26.52■■□□□ 1.84
PPP4R1-221ENST00000582240 TRMT112Q9UI30 125 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms