RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 HSPA1BP0DMV9 641 aaKnown RBP8.64□□□□□ -1.03
SENP3-206ENST00000581093 SETDB1Q15047 1291 aa8.64□□□□□ -1.03
SENP3-206ENST00000581093 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
SENP3-206ENST00000581093 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
SENP3-206ENST00000581093 RBM46Q8TBY0 533 aaKnown RBP8.64□□□□□ -1.03
SENP3-206ENST00000581093 IGSF5Q9NSI5 407 aa8.64□□□□□ -1.03
SENP3-206ENST00000581093 TULP4Q9NRJ4 1543 aa8.64□□□□□ -1.03
SENP3-206ENST00000581093 PDE4DIPQ5VU43 2346 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 VASPP50552 380 aaPredicted RBP8.63□□□□□ -1.03
SENP3-206ENST00000581093 HSP90AA2PQ14568 343 aaPredicted RBP8.63□□□□□ -1.03
SENP3-206ENST00000581093 NBPF9Q3BBW0 867 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 RGL3Q3MIN7 710 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
SENP3-206ENST00000581093 FBXW7Q969H0 707 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
SENP3-206ENST00000581093 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 SUGT1Q9Y2Z0 365 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 CD2APQ9Y5K6 639 aa8.63□□□□□ -1.03
SENP3-206ENST00000581093 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 FANCIQ9NVI1 1328 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 WNK3Q9BYP7 1800 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 EXOC5O00471 708 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 GCP02774 474 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 APPP05067 770 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 EGFL6Q8IUX8 553 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 OTUD6BQ8N6M0 293 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 ABTB2Q8N961 1025 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
SENP3-206ENST00000581093 MTA3Q9BTC8 594 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 CARD10Q9BWT7 1032 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 C14orf93Q9H972 538 aaKnown RBP8.62□□□□□ -1.03
SENP3-206ENST00000581093 TFCP2L1Q9NZI6 479 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
SENP3-206ENST00000581093 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
SENP3-206ENST00000581093 USP19O94966 1318 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
SENP3-206ENST00000581093 FSTL1Q12841 308 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 FAM161AQ3B820 660 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 APBB1IPQ7Z5R6 666 aaPredicted RBP8.61□□□□□ -1.03
SENP3-206ENST00000581093 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 NMRK2Q9NPI5 230 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
SENP3-206ENST00000581093 BTAF1O14981 1849 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
SENP3-206ENST00000581093 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
SENP3-206ENST00000581093 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
SENP3-206ENST00000581093 PSEN2P49810 448 aa8.6□□□□□ -1.03
SENP3-206ENST00000581093 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
SENP3-206ENST00000581093 RBM26Q5T8P6 1007 aaKnown RBP8.6□□□□□ -1.03
SENP3-206ENST00000581093 TSPAN18Q96SJ8 248 aa8.6□□□□□ -1.03
SENP3-206ENST00000581093 USP6P35125 1406 aa8.6□□□□□ -1.03
SENP3-206ENST00000581093 GOLIM4O00461 696 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 TCERG1O14776 1098 aaKnown RBP8.59□□□□□ -1.03
SENP3-206ENST00000581093 ANP32CO43423 234 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 ITGAEP38570 1179 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 C16orf71Q8IYS4 520 aaPredicted RBP8.59□□□□□ -1.03
SENP3-206ENST00000581093 NUB1Q9Y5A7 615 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 SPATA31E1Q6ZUB1 1445 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 ITSN1Q15811 1721 aa8.59□□□□□ -1.03
SENP3-206ENST00000581093 WDR17Q8IZU2 1322 aa8.58□□□□□ -1.04
SENP3-206ENST00000581093 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
SENP3-206ENST00000581093 TRAF7Q6Q0C0 670 aa8.58□□□□□ -1.04
SENP3-206ENST00000581093 KRBA2Q6ZNG9 492 aa8.58□□□□□ -1.04
SENP3-206ENST00000581093 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
SENP3-206ENST00000581093 TMEM51Q9NW97 253 aa8.58□□□□□ -1.04
SENP3-206ENST00000581093 IGSF1Q8N6C5 1336 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 SOX12O15370 315 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 ECM2O94769 699 aaPredicted RBP8.57□□□□□ -1.04
SENP3-206ENST00000581093 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
SENP3-206ENST00000581093 LONRF3Q496Y0 759 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
SENP3-206ENST00000581093 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
SENP3-206ENST00000581093 POLR3AO14802 1390 aaPredicted RBP8.57□□□□□ -1.04
SENP3-206ENST00000581093 ACEP12821 1306 aa8.56□□□□□ -1.04
SENP3-206ENST00000581093 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
SENP3-206ENST00000581093 COL23A1Q86Y22 540 aaPredicted RBP8.56□□□□□ -1.04
SENP3-206ENST00000581093 MS4A4AQ96JQ5 239 aa8.56□□□□□ -1.04
SENP3-206ENST00000581093 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
SENP3-206ENST00000581093 COL18A1P39060 1754 aa8.56□□□□□ -1.04
SENP3-206ENST00000581093 CICQ96RK0 1608 aaPredicted RBP8.55□□□□□ -1.04
SENP3-206ENST00000581093 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 LIG1P18858 919 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 KCNQ4P56696 695 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 IRF5Q13568 498 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 LAPTM4AQ15012 233 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 MAGEC2Q9UBF1 373 aaPredicted RBP8.55□□□□□ -1.04
SENP3-206ENST00000581093 TRAK1Q9UPV9 953 aa8.55□□□□□ -1.04
SENP3-206ENST00000581093 TRPM1Q7Z4N2 1603 aa8.54□□□□□ -1.04
SENP3-206ENST00000581093 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
SENP3-206ENST00000581093 MLLT1Q03111 559 aaPredicted RBP8.54□□□□□ -1.04
SENP3-206ENST00000581093 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
SENP3-206ENST00000581093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
SENP3-206ENST00000581093 MORC4Q8TE76 937 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms