RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TXLNAP40222 546 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 ARFGAP3Q9NP61 516 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 BTBD11A6QL63 1104 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCDC181Q5TID7 509 aa15.26■□□□□ 0.03
PCDHGB3-201ENST00000576222 GABPB1Q06547 395 aaPredicted RBP15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 MYL6BP14649 208 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 PKP1Q13835 747 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 IQCEQ6IPM2 695 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 BRD1O95696 1058 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 ZSWIM4Q9H7M6 989 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
PCDHGB3-201ENST00000576222 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 TUBB4AP04350 444 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCDC191Q8NCU4 936 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 CALRP27797 417 aaKnown RBP15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 IMMTQ16891 758 aaKnown RBP15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 AOPEPQ8N6M6 819 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 GOLGA6L10A6NI86 522 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 WDR62O43379 1518 aa15.24■□□□□ 0.03
PCDHGB3-201ENST00000576222 ISM2Q6H9L7 571 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 ERO1AQ96HE7 468 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 SRRTQ9BXP5 876 aaKnown RBP15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 SHTN1A0MZ66 631 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 VPS53Q5VIR6 699 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
PCDHGB3-201ENST00000576222 KLHL10Q6JEL2 608 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 CNNM3Q8NE01 707 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 CCDC12Q8WUD4 166 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 STIM1Q13586 685 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 IDI1Q13907 227 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 CPLX3Q8WVH0 158 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 SHANK2Q9UPX8 1470 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 UBASH3AP57075 661 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 KIAA1328Q86T90 577 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 BRF1Q92994 677 aa15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 ZFP91Q96JP5 570 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 IBTKQ9P2D0 1353 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB3-201ENST00000576222 KDM5CP41229 1560 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 PPFIA3O75145 1194 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 FAM107BQ9H098 131 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 POLR3DP05423 398 aaPredicted RBP15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 SYT10Q6XYQ8 523 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 MCM3P25205 808 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 ATP10BO94823 1461 aa15.21■□□□□ 0.03
PCDHGB3-201ENST00000576222 VPS37DQ86XT2 251 aa15.21■□□□□ 0.02
PCDHGB3-201ENST00000576222 GTF3C6Q969F1 213 aa15.21■□□□□ 0.02
PCDHGB3-201ENST00000576222 CENPHQ9H3R5 247 aa15.21■□□□□ 0.02
PCDHGB3-201ENST00000576222 WASLO00401 505 aaPredicted RBP15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 GSPT1P15170 499 aaKnown RBP15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 PI4KAP2A4QPH2 592 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 PI4KAP1Q8N8J0 262 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 DUOX2Q9NRD8 1548 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 MCM6Q14566 821 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 WASF1Q92558 559 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
PCDHGB3-201ENST00000576222 EPS15P42566 896 aa15.19■□□□□ 0.02
PCDHGB3-201ENST00000576222 CPA1P15085 419 aa15.19■□□□□ 0.02
PCDHGB3-201ENST00000576222 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
PCDHGB3-201ENST00000576222 IVLP07476 585 aa15.19■□□□□ 0.02
PCDHGB3-201ENST00000576222 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
PCDHGB3-201ENST00000576222 EIF5P55010 431 aaKnown RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 ZSCAN25Q6NSZ9 544 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 KDM6BO15054 1643 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 DMTNQ08495 405 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 LUC7LQ9NQ29 371 aaKnown RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 MYO6Q9UM54 1294 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 ZNF75DP51815 510 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms