RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
CALCOCO2-227ENST00000575560 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
CALCOCO2-227ENST00000575560 CNTNAP1P78357 1384 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 SLX4Q8IY92 1834 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 KLRG2A4D1S0 409 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 FOXN1O15353 648 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 ITGBL1O95965 494 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 ST5P78524 1137 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 LDHDQ86WU2 507 aa13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO2-227ENST00000575560 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
CALCOCO2-227ENST00000575560 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 KCNQ3O43525 872 aa13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 USP16Q9Y5T5 823 aa13.45□□□□□ -0.26
CALCOCO2-227ENST00000575560 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
CALCOCO2-227ENST00000575560 NPHP1O15259 732 aa13.44□□□□□ -0.26
CALCOCO2-227ENST00000575560 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 U2SURPO15042 1029 aaKnown RBP13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 NPR1P16066 1061 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 VEGFBP49765 207 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 CCDC93Q567U6 631 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 PHACTR3Q96KR7 559 aa13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-227ENST00000575560 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
CALCOCO2-227ENST00000575560 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
CALCOCO2-227ENST00000575560 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
CALCOCO2-227ENST00000575560 RGL2O15211 777 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 ZNF277Q9NRM2 450 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 HACL1Q9UJ83 578 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 SCN4AP35499 1836 aa13.41□□□□□ -0.26
CALCOCO2-227ENST00000575560 ZNF541Q9H0D2 1346 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 FZD9O00144 591 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 KCNA4P22459 653 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
CALCOCO2-227ENST00000575560 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
CALCOCO2-227ENST00000575560 EPHX2P34913 555 aa13.39□□□□□ -0.27
CALCOCO2-227ENST00000575560 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
CALCOCO2-227ENST00000575560 PNMA8AQ86V59 439 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO2-227ENST00000575560 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
CALCOCO2-227ENST00000575560 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 LBX1P52954 281 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 CNTROBQ8N137 903 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 AIDAQ96BJ3 306 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
CALCOCO2-227ENST00000575560 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 GPC2Q8N158 579 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
CALCOCO2-227ENST00000575560 HLFQ16534 295 aa13.36□□□□□ -0.27
CALCOCO2-227ENST00000575560 MCM10Q7L590 875 aa13.36□□□□□ -0.27
CALCOCO2-227ENST00000575560 PSMD1Q99460 953 aa13.36□□□□□ -0.27
CALCOCO2-227ENST00000575560 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
CALCOCO2-227ENST00000575560 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
CALCOCO2-227ENST00000575560 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
CALCOCO2-227ENST00000575560 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
CALCOCO2-227ENST00000575560 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
CALCOCO2-227ENST00000575560 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
CALCOCO2-227ENST00000575560 HTATSF1O43719 755 aaKnown RBP13.34□□□□□ -0.27
CALCOCO2-227ENST00000575560 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO2-227ENST00000575560 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
CALCOCO2-227ENST00000575560 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 CC2D2BQ6DHV5 1058 aa13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 DDX21Q9NR30 783 aaKnown RBP eCLIP13.33□□□□□ -0.28
CALCOCO2-227ENST00000575560 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
CALCOCO2-227ENST00000575560 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-227ENST00000575560 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-227ENST00000575560 ABHD8Q96I13 439 aa13.32□□□□□ -0.28
CALCOCO2-227ENST00000575560 CFAP53Q96M91 514 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms