RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 PTGER2P43116 358 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 MRPL50Q8N5N7 158 aaKnown RBP8.56□□□□□ -1.04
PRPF8-210ENST00000574217 SGIP1Q9BQI5 828 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 DDX21Q9NR30 783 aaKnown RBP eCLIP8.56□□□□□ -1.04
PRPF8-210ENST00000574217 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 A0A087WZG4 1122 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 ZPR1O75312 459 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 BRPF1P55201 1214 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-210ENST00000574217 PDIA6Q15084 440 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 PROSER3Q2NL68 480 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
PRPF8-210ENST00000574217 DZIP3Q86Y13 1208 aaKnown RBP8.55□□□□□ -1.04
PRPF8-210ENST00000574217 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-210ENST00000574217 FRAT1Q92837 279 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-210ENST00000574217 ARXQ96QS3 562 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
PRPF8-210ENST00000574217 NUP98P52948 1817 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
PRPF8-210ENST00000574217 CAMTA2O94983 1202 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 POLD1P28340 1107 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 FLIIQ13045 1269 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 FKBP8Q14318 412 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 TTLL7Q6ZT98 887 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 NOB1Q9ULX3 412 aaKnown RBP8.54□□□□□ -1.04
PRPF8-210ENST00000574217 SUPT16HQ9Y5B9 1047 aaKnown RBP8.54□□□□□ -1.04
PRPF8-210ENST00000574217 AFDNP55196 1824 aaKnown RBP8.54□□□□□ -1.04
PRPF8-210ENST00000574217 PTPRCP08575 1304 aa8.54□□□□□ -1.04
PRPF8-210ENST00000574217 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
PRPF8-210ENST00000574217 MMP10P09238 476 aa8.53□□□□□ -1.04
PRPF8-210ENST00000574217 RRP1P56182 461 aaKnown RBP8.53□□□□□ -1.04
PRPF8-210ENST00000574217 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
PRPF8-210ENST00000574217 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
PRPF8-210ENST00000574217 NLGN1Q8N2Q7 840 aa8.53□□□□□ -1.04
PRPF8-210ENST00000574217 PHAXQ9H814 394 aaKnown RBP8.53□□□□□ -1.04
PRPF8-210ENST00000574217 PPP1R1BQ9UD71 204 aaPredicted RBP8.53□□□□□ -1.04
PRPF8-210ENST00000574217 CACNA1FO60840 1977 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 TM4SF1P30408 202 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 DDR1Q08345 913 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 AIMP1Q12904 312 aaKnown RBP8.52□□□□□ -1.05
PRPF8-210ENST00000574217 NFIXQ14938 502 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 HLFQ16534 295 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 TBC1D9BQ66K14 1250 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 G2E3Q7L622 706 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 API5Q9BZZ5 524 aaKnown RBP8.52□□□□□ -1.05
PRPF8-210ENST00000574217 RNF123Q5XPI4 1314 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
PRPF8-210ENST00000574217 ANKRD36CQ5JPF3 1778 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 ARFGEF2Q9Y6D5 1785 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 POLRMTO00411 1230 aaKnown RBP8.51□□□□□ -1.05
PRPF8-210ENST00000574217 PLIN1O60240 522 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 MS4A1P11836 297 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 TRIM27P14373 513 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 KIF6Q6ZMV9 814 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 FTSJ3Q8IY81 847 aaKnown RBP8.51□□□□□ -1.05
PRPF8-210ENST00000574217 ZBTB3Q9H5J0 574 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
PRPF8-210ENST00000574217 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 CLEC4GQ6UXB4 293 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 KSR2Q6VAB6 950 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 ANKRD13DQ6ZTN6 518 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 RIC3Q7Z5B4 369 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
PRPF8-210ENST00000574217 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 PLBD2Q8NHP8 589 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 FHDC1Q9C0D6 1143 aaPredicted RBP8.5□□□□□ -1.05
PRPF8-210ENST00000574217 ZNF652Q9Y2D9 606 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
PRPF8-210ENST00000574217 ADCY9O60503 1353 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 F6X3S4 739 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 RGL2O15211 777 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 SERPINB2P05120 415 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 SLC4A10Q6U841 1118 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
PRPF8-210ENST00000574217 DNAAF4Q8WXU2 420 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 PXDNLA1KZ92 1463 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 ABCC4O15439 1325 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
PRPF8-210ENST00000574217 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
PRPF8-210ENST00000574217 ATP10DQ9P241 1426 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 DCAF8L1A6NGE4 600 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 NEFLP07196 543 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 GPTP24298 496 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 PANK1Q8TE04 598 aa8.48□□□□□ -1.05
PRPF8-210ENST00000574217 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms