RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 ANP32CO43423 234 aa13.51□□□□□ -0.25
HCFC1R1-206ENST00000574151 PDE6BP35913 854 aa13.51□□□□□ -0.25
HCFC1R1-206ENST00000574151 CABP4P57796 275 aa13.51□□□□□ -0.25
HCFC1R1-206ENST00000574151 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
HCFC1R1-206ENST00000574151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
HCFC1R1-206ENST00000574151 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
HCFC1R1-206ENST00000574151 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
HCFC1R1-206ENST00000574151 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
HCFC1R1-206ENST00000574151 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 CELF2O95319 508 aaKnown RBP13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 EYA1Q99502 592 aa13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
HCFC1R1-206ENST00000574151 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
HCFC1R1-206ENST00000574151 FYB1O15117 783 aa13.48□□□□□ -0.25
HCFC1R1-206ENST00000574151 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
HCFC1R1-206ENST00000574151 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
HCFC1R1-206ENST00000574151 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
HCFC1R1-206ENST00000574151 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 EPS15P42566 896 aa13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 GPC2Q8N158 579 aa13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
HCFC1R1-206ENST00000574151 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 TRPA1O75762 1119 aa13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 PRR5LQ6MZQ0 368 aa13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 CTU1Q7Z7A3 348 aaKnown RBP13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
HCFC1R1-206ENST00000574151 NCAPD2Q15021 1401 aa13.46□□□□□ -0.26
HCFC1R1-206ENST00000574151 COL15A1P39059 1388 aa13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 FZD9O00144 591 aa13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
HCFC1R1-206ENST00000574151 NPHP1O15259 732 aa13.44□□□□□ -0.26
HCFC1R1-206ENST00000574151 NOGQ13253 232 aa13.44□□□□□ -0.26
HCFC1R1-206ENST00000574151 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
HCFC1R1-206ENST00000574151 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
HCFC1R1-206ENST00000574151 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
HCFC1R1-206ENST00000574151 KIF20BQ96Q89 1820 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 SRGNP10124 158 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 MASTLQ96GX5 879 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
HCFC1R1-206ENST00000574151 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
HCFC1R1-206ENST00000574151 AKAP4Q5JQC9 854 aa13.42□□□□□ -0.26
HCFC1R1-206ENST00000574151 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 TRIOBPQ9H2D6 2365 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 MTHFSP49914 203 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 SCNN1DP51172 638 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 USP50Q70EL3 339 aaPredicted RBP13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
HCFC1R1-206ENST00000574151 KIF23Q02241 960 aaPredicted RBP13.4□□□□□ -0.26
HCFC1R1-206ENST00000574151 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
HCFC1R1-206ENST00000574151 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
HCFC1R1-206ENST00000574151 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
HCFC1R1-206ENST00000574151 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
HCFC1R1-206ENST00000574151 HUNKP57058 714 aa13.39□□□□□ -0.27
HCFC1R1-206ENST00000574151 TESK2Q96S53 571 aa13.39□□□□□ -0.27
HCFC1R1-206ENST00000574151 A0A0C4DFX4 3053 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 NEFLP07196 543 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 RTKN2Q8IZC4 609 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
HCFC1R1-206ENST00000574151 ST5P78524 1137 aa13.37□□□□□ -0.27
HCFC1R1-206ENST00000574151 DDX10Q13206 875 aaKnown RBP13.37□□□□□ -0.27
HCFC1R1-206ENST00000574151 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
HCFC1R1-206ENST00000574151 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 DLK2Q6UY11 383 aa13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 COL4A5P29400 1685 aa13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
HCFC1R1-206ENST00000574151 PKN2Q16513 984 aaKnown RBP13.35□□□□□ -0.27
HCFC1R1-206ENST00000574151 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
HCFC1R1-206ENST00000574151 RGMBQ6NW40 437 aa13.35□□□□□ -0.27
HCFC1R1-206ENST00000574151 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
HCFC1R1-206ENST00000574151 CEP290O15078 2479 aa13.35□□□□□ -0.27
HCFC1R1-206ENST00000574151 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
HCFC1R1-206ENST00000574151 ADARB2Q9NS39 739 aaKnown RBP13.34□□□□□ -0.27
HCFC1R1-206ENST00000574151 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 641.9 ms