RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 AK7Q96M32 723 aa16.2■□□□□ 0.18
CLK3-214ENST00000564096 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
CLK3-214ENST00000564096 COL15A1P39059 1388 aa16.2■□□□□ 0.18
CLK3-214ENST00000564096 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
CLK3-214ENST00000564096 F6X3S4 739 aa16.19■□□□□ 0.18
CLK3-214ENST00000564096 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
CLK3-214ENST00000564096 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
CLK3-214ENST00000564096 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
CLK3-214ENST00000564096 BAG6P46379 1132 aa16.18■□□□□ 0.18
CLK3-214ENST00000564096 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
CLK3-214ENST00000564096 INTS5Q6P9B9 1019 aaKnown RBP16.18■□□□□ 0.18
CLK3-214ENST00000564096 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
CLK3-214ENST00000564096 IBTKQ9P2D0 1353 aaPredicted RBP16.17■□□□□ 0.18
CLK3-214ENST00000564096 GNPATO15228 680 aa16.17■□□□□ 0.18
CLK3-214ENST00000564096 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
CLK3-214ENST00000564096 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
CLK3-214ENST00000564096 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
CLK3-214ENST00000564096 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 ARXQ96QS3 562 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 METTL22Q9BUU2 404 aaPredicted RBP16.16■□□□□ 0.18
CLK3-214ENST00000564096 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
CLK3-214ENST00000564096 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
CLK3-214ENST00000564096 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 KCNQ4P56696 695 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 ZBTB3Q9H5J0 574 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
CLK3-214ENST00000564096 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 RGL2O15211 777 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 GNAI3P08754 354 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 MYD88Q99836 296 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 SCN7AQ01118 1682 aa16.14■□□□□ 0.17
CLK3-214ENST00000564096 SSFA2P28290 1259 aa16.12■□□□□ 0.17
CLK3-214ENST00000564096 EP400Q96L91 3159 aa16.12■□□□□ 0.17
CLK3-214ENST00000564096 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
CLK3-214ENST00000564096 GIGYF2Q6Y7W6 1299 aaKnown RBP16.11■□□□□ 0.17
CLK3-214ENST00000564096 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CLK3-214ENST00000564096 NEURL1BA8MQ27 555 aa16.1■□□□□ 0.17
CLK3-214ENST00000564096 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
CLK3-214ENST00000564096 ZPR1O75312 459 aa16.1■□□□□ 0.17
CLK3-214ENST00000564096 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
CLK3-214ENST00000564096 ZBTB40Q9NUA8 1239 aa16.1■□□□□ 0.17
CLK3-214ENST00000564096 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
CLK3-214ENST00000564096 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
CLK3-214ENST00000564096 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
CLK3-214ENST00000564096 PHF14O94880 888 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 RFC4P35249 363 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 CWF19L2Q2TBE0 894 aaKnown RBP16.09■□□□□ 0.17
CLK3-214ENST00000564096 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 CAMKK2Q96RR4 588 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 MEIS3Q99687 375 aa16.09■□□□□ 0.17
CLK3-214ENST00000564096 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
CLK3-214ENST00000564096 GRM8O00222 908 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 GNAI2P04899 355 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.16
CLK3-214ENST00000564096 GCKRQ14397 625 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 PROM2Q8N271 834 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 FLAD1Q8NFF5 587 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
CLK3-214ENST00000564096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
CLK3-214ENST00000564096 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
CLK3-214ENST00000564096 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
CLK3-214ENST00000564096 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
CLK3-214ENST00000564096 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
CLK3-214ENST00000564096 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
CLK3-214ENST00000564096 USP42Q9H9J4 1324 aaKnown RBP16.07■□□□□ 0.16
CLK3-214ENST00000564096 C4AP0C0L4 1744 aa16.07■□□□□ 0.16
CLK3-214ENST00000564096 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
CLK3-214ENST00000564096 AFDNP55196 1824 aaKnown RBP16.06■□□□□ 0.16
CLK3-214ENST00000564096 TRIM28Q13263 835 aaKnown RBP16.06■□□□□ 0.16
CLK3-214ENST00000564096 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
CLK3-214ENST00000564096 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
CLK3-214ENST00000564096 UTYO14607 1347 aa16.05■□□□□ 0.16
CLK3-214ENST00000564096 HLFQ16534 295 aa16.05■□□□□ 0.16
CLK3-214ENST00000564096 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
CLK3-214ENST00000564096 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
CLK3-214ENST00000564096 UPF1Q92900 1129 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLK3-214ENST00000564096 MSH5O43196 834 aa16.04■□□□□ 0.16
CLK3-214ENST00000564096 HMMRO75330 724 aa16.04■□□□□ 0.16
CLK3-214ENST00000564096 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
CLK3-214ENST00000564096 RPAP2Q8IXW5 612 aaPredicted RBP16.04■□□□□ 0.16
CLK3-214ENST00000564096 RWDD1Q9H446 243 aaPredicted RBP16.04■□□□□ 0.16
CLK3-214ENST00000564096 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
CLK3-214ENST00000564096 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms