RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 NUCB1Q02818 461 aa10.99□□□□□ -0.65
AC138869.3-201ENST00000563960 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
AC138869.3-201ENST00000563960 APPP05067 770 aa10.99□□□□□ -0.65
AC138869.3-201ENST00000563960 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
AC138869.3-201ENST00000563960 BTG4Q9NY30 223 aa10.99□□□□□ -0.65
AC138869.3-201ENST00000563960 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 DZIP1LQ8IYY4 767 aaKnown RBP10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 FCHSD2O94868 740 aa10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 EVA1CP58658 441 aa10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
AC138869.3-201ENST00000563960 RABEP1Q15276 862 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 ERBB3P21860 1342 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 CPDO75976 1380 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 SMTNL1A8MU46 457 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 DHX16O60231 1041 aaKnown RBP10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 BCCIPQ9P287 314 aaKnown RBP eCLIP10.97□□□□□ -0.65
AC138869.3-201ENST00000563960 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
AC138869.3-201ENST00000563960 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
AC138869.3-201ENST00000563960 CHD1LQ86WJ1 897 aa10.96□□□□□ -0.65
AC138869.3-201ENST00000563960 FOXD4L4Q8WXT5 416 aaPredicted RBP10.96□□□□□ -0.65
AC138869.3-201ENST00000563960 TMX1Q9H3N1 280 aa10.96□□□□□ -0.65
AC138869.3-201ENST00000563960 RTL1A6NKG5 1358 aa10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 KIF24Q5T7B8 1368 aa10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 JCADQ9P266 1359 aa10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 TOM1L2Q6ZVM7 507 aa10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.66
AC138869.3-201ENST00000563960 LTN1O94822 1766 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 KDM4AO75164 1064 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 AXDND1Q5T1B0 1012 aaPredicted RBP10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 CNPY4Q8N129 248 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 RASSF4Q9H2L5 321 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 IGSF1Q8N6C5 1336 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 USP54Q70EL1 1684 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 GTF2A1P52655 376 aaPredicted RBP10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 KIF1BPQ96EK5 621 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
AC138869.3-201ENST00000563960 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 AP5Z1O43299 807 aa10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 PHF14O94880 888 aa10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 HCLS1P14317 486 aaPredicted RBP10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 NOL10Q9BSC4 688 aaKnown RBP10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 DDX19BQ9UMR2 479 aa10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 PHRF1Q9P1Y6 1649 aaKnown RBP10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
AC138869.3-201ENST00000563960 REC8O95072 547 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 TRIM27P14373 513 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 TMPOP42166 694 aaKnown RBP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 C16orf45Q96MC5 204 aaPredicted RBP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 THUMPD2Q9BTF0 503 aaKnown RBP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 ZNF446Q9NWS9 450 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 GADD45BO75293 160 aaPredicted RBP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 GYS2P54840 703 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 EP400NLQ6ZTU2 488 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 CCDC112Q8NEF3 446 aa10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 TSR2Q969E8 191 aaKnown RBP10.93□□□□□ -0.66
AC138869.3-201ENST00000563960 TPM3P06753 285 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 MTHFSDQ2M296 383 aaKnown RBP10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 ICE2Q659A1 982 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 FBXO38Q6PIJ6 1188 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 SPC24Q8NBT2 197 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 MYCBPQ99417 103 aaPredicted RBP10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 NCAPGQ9BPX3 1015 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
AC138869.3-201ENST00000563960 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 TRIM66O15016 1216 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 TNNT1P13805 278 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 SYT10Q6XYQ8 523 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 CDC45O75419 566 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 MUM1L1Q5H9M0 696 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 SMC4Q9NTJ3 1288 aa10.91□□□□□ -0.66
AC138869.3-201ENST00000563960 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 SMARCA5O60264 1052 aaPredicted RBP10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 BRD1O95696 1058 aa10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 EXOSC9Q06265 439 aaKnown RBP10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 NFE2L2Q16236 605 aa10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 CTR9Q6PD62 1173 aa10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 C10orf67Q8IYJ2 551 aa10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 USP26Q9BXU7 913 aa10.9□□□□□ -0.66
AC138869.3-201ENST00000563960 COL18A1P39060 1754 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms