RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZBTB1Q9Y2K1 713 aa27.55■■■□□ 2
LINC01960-201ENST00000563759 TTLL7Q6ZT98 887 aa27.55■■■□□ 2
LINC01960-201ENST00000563759 METTL22Q9BUU2 404 aaPredicted RBP27.55■■■□□ 2
LINC01960-201ENST00000563759 TAF1LQ8IZX4 1826 aa27.54■■■□□ 2
LINC01960-201ENST00000563759 UBTFL1P0CB47 393 aaPredicted RBP27.54■■■□□ 2
LINC01960-201ENST00000563759 ITPK1Q13572 414 aa27.54■■■□□ 2
LINC01960-201ENST00000563759 CWF19L2Q2TBE0 894 aaKnown RBP27.54■■■□□ 2
LINC01960-201ENST00000563759 USP44Q9H0E7 712 aa27.54■■■□□ 2
LINC01960-201ENST00000563759 GNAI2P04899 355 aa27.53■■■□□ 2
LINC01960-201ENST00000563759 MYD88Q99836 296 aa27.53■■■□□ 2
LINC01960-201ENST00000563759 CCDC87Q9NVE4 849 aa27.53■■■□□ 2
LINC01960-201ENST00000563759 CRKLP46109 303 aaKnown RBP27.52■■■□□ 2
LINC01960-201ENST00000563759 KIF6Q6ZMV9 814 aa27.52■■■□□ 2
LINC01960-201ENST00000563759 NPM2Q86SE8 214 aaKnown RBP27.52■■■□□ 2
LINC01960-201ENST00000563759 BCL11BQ9C0K0 894 aaPredicted RBP27.52■■■□□ 2
LINC01960-201ENST00000563759 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
LINC01960-201ENST00000563759 ANKRD36CQ5JPF3 1778 aa27.51■■■□□ 2
LINC01960-201ENST00000563759 RGS17Q9UGC6 210 aaPredicted RBP27.51■■□□□ 1.99
LINC01960-201ENST00000563759 C9orf78Q9NZ63 289 aaPredicted RBP27.51■■□□□ 1.99
LINC01960-201ENST00000563759 NUP98P52948 1817 aa27.5■■□□□ 1.99
LINC01960-201ENST00000563759 IL6STP40189 918 aaPredicted RBP27.5■■□□□ 1.99
LINC01960-201ENST00000563759 ARXQ96QS3 562 aa27.5■■□□□ 1.99
LINC01960-201ENST00000563759 IGKV5-2P06315 115 aa27.49■■□□□ 1.99
LINC01960-201ENST00000563759 CEP85Q6P2H3 762 aa27.49■■□□□ 1.99
LINC01960-201ENST00000563759 RPAP2Q8IXW5 612 aaPredicted RBP27.49■■□□□ 1.99
LINC01960-201ENST00000563759 NEURL1BA8MQ27 555 aa27.49■■□□□ 1.99
LINC01960-201ENST00000563759 ANKRD44Q8N8A2 993 aa27.49■■□□□ 1.99
LINC01960-201ENST00000563759 NBPF7P0C2Y1 421 aaPredicted RBP27.48■■□□□ 1.99
LINC01960-201ENST00000563759 SIRT2Q8IXJ6 389 aa27.48■■□□□ 1.99
LINC01960-201ENST00000563759 LRRFIP2Q9Y608 721 aaKnown RBP27.48■■□□□ 1.99
LINC01960-201ENST00000563759 INTS5Q6P9B9 1019 aaKnown RBP27.47■■□□□ 1.99
LINC01960-201ENST00000563759 CCNL1Q9UK58 526 aaPredicted RBP27.47■■□□□ 1.99
LINC01960-201ENST00000563759 IBTKQ9P2D0 1353 aaPredicted RBP27.47■■□□□ 1.99
LINC01960-201ENST00000563759 POTEAQ6S8J7 498 aa27.47■■□□□ 1.99
LINC01960-201ENST00000563759 GRM8O00222 908 aa27.46■■□□□ 1.99
LINC01960-201ENST00000563759 KCNQ4P56696 695 aa27.46■■□□□ 1.99
LINC01960-201ENST00000563759 TRIM37O94972 964 aa27.45■■□□□ 1.99
LINC01960-201ENST00000563759 LINC00116Q8NCU8 138 aa27.45■■□□□ 1.99
LINC01960-201ENST00000563759 MAP3K15Q6ZN16 1313 aa27.45■■□□□ 1.98
LINC01960-201ENST00000563759 ATP5J2-PTCD1G3V325 749 aa27.44■■□□□ 1.98
LINC01960-201ENST00000563759 GCKRQ14397 625 aa27.44■■□□□ 1.98
LINC01960-201ENST00000563759 HMMRO75330 724 aa27.44■■□□□ 1.98
LINC01960-201ENST00000563759 HDAC5Q9UQL6 1122 aa27.44■■□□□ 1.98
LINC01960-201ENST00000563759 DZIP3Q86Y13 1208 aaKnown RBP27.43■■□□□ 1.98
LINC01960-201ENST00000563759 BCORQ6W2J9 1755 aa27.43■■□□□ 1.98
LINC01960-201ENST00000563759 EIF5P55010 431 aaKnown RBP27.42■■□□□ 1.98
LINC01960-201ENST00000563759 SMC5Q8IY18 1101 aa27.42■■□□□ 1.98
LINC01960-201ENST00000563759 CNTNAP4Q9C0A0 1308 aa27.42■■□□□ 1.98
LINC01960-201ENST00000563759 SKAP1Q86WV1 359 aa27.42■■□□□ 1.98
LINC01960-201ENST00000563759 GCC1Q96CN9 775 aa27.42■■□□□ 1.98
LINC01960-201ENST00000563759 C4BP0C0L5 1744 aa27.42■■□□□ 1.98
LINC01960-201ENST00000563759 UTYO14607 1347 aa27.41■■□□□ 1.98
LINC01960-201ENST00000563759 COL15A1P39059 1388 aa27.41■■□□□ 1.98
LINC01960-201ENST00000563759 TBC1D2BQ9UPU7 963 aa27.4■■□□□ 1.98
LINC01960-201ENST00000563759 GIGYF2Q6Y7W6 1299 aaKnown RBP27.39■■□□□ 1.98
LINC01960-201ENST00000563759 CWC25Q9NXE8 425 aaPredicted RBP27.39■■□□□ 1.98
LINC01960-201ENST00000563759 PDZRN3Q9UPQ7 1066 aa27.39■■□□□ 1.98
LINC01960-201ENST00000563759 TCIRG1Q13488 830 aa27.38■■□□□ 1.97
LINC01960-201ENST00000563759 CCDC191Q8NCU4 936 aa27.38■■□□□ 1.97
LINC01960-201ENST00000563759 TNS1Q9HBL0 1735 aaKnown RBP27.37■■□□□ 1.97
LINC01960-201ENST00000563759 A0A087WZG4 1122 aa27.37■■□□□ 1.97
LINC01960-201ENST00000563759 ATP8B2P98198 1209 aa27.37■■□□□ 1.97
LINC01960-201ENST00000563759 HSP90AB3PQ58FF7 597 aa27.37■■□□□ 1.97
LINC01960-201ENST00000563759 ERVV-1B6SEH8 477 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 RGS3P49796 1198 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 UBE3BQ7Z3V4 1068 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 SCN7AQ01118 1682 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 PNMA6EA0A0J9YXQ4 647 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 HLFQ16534 295 aa27.36■■□□□ 1.97
LINC01960-201ENST00000563759 RC3H1Q5TC82 1133 aaKnown RBP27.35■■□□□ 1.97
LINC01960-201ENST00000563759 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
LINC01960-201ENST00000563759 ISCA1Q9BUE6 129 aa27.35■■□□□ 1.97
LINC01960-201ENST00000563759 DCTPP1Q9H773 170 aa27.35■■□□□ 1.97
LINC01960-201ENST00000563759 PPP1R42Q7Z4L9 355 aa27.34■■□□□ 1.97
LINC01960-201ENST00000563759 C4AP0C0L4 1744 aa27.33■■□□□ 1.97
LINC01960-201ENST00000563759 GNPATO15228 680 aa27.33■■□□□ 1.97
LINC01960-201ENST00000563759 SRGAP3O43295 1099 aa27.33■■□□□ 1.97
LINC01960-201ENST00000563759 NUCB1Q02818 461 aa27.32■■□□□ 1.96
LINC01960-201ENST00000563759 SLC27A3Q5K4L6 730 aa27.32■■□□□ 1.96
LINC01960-201ENST00000563759 BICC1Q9H694 974 aaKnown RBP27.32■■□□□ 1.96
LINC01960-201ENST00000563759 UBR3Q6ZT12 1888 aa27.32■■□□□ 1.96
LINC01960-201ENST00000563759 JARID2Q92833 1246 aaPredicted RBP27.32■■□□□ 1.96
LINC01960-201ENST00000563759 GPTP24298 496 aa27.31■■□□□ 1.96
LINC01960-201ENST00000563759 TRIM28Q13263 835 aaKnown RBP27.31■■□□□ 1.96
LINC01960-201ENST00000563759 ANKRD45Q5TZF3 282 aa27.31■■□□□ 1.96
LINC01960-201ENST00000563759 SSH3Q8TE77 659 aa27.31■■□□□ 1.96
LINC01960-201ENST00000563759 MYH3P11055 1940 aa27.31■■□□□ 1.96
LINC01960-201ENST00000563759 RGPD3A6NKT7 1758 aaPredicted RBP27.3■■□□□ 1.96
LINC01960-201ENST00000563759 RGPD4Q7Z3J3 1758 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 CAMTA2O94983 1202 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 MTX1Q13505 466 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 KAZALD1Q96I82 304 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 LRRC4BQ9NT99 713 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 RPS6KA4O75676 772 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 RTL5Q5HYW3 569 aaPredicted RBP27.3■■□□□ 1.96
LINC01960-201ENST00000563759 CHD1LQ86WJ1 897 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 AK7Q96M32 723 aa27.3■■□□□ 1.96
LINC01960-201ENST00000563759 ZBTB47Q9UFB7 747 aaPredicted RBP27.3■■□□□ 1.96
LINC01960-201ENST00000563759 RTCBQ9Y3I0 505 aaKnown RBP27.3■■□□□ 1.96
LINC01960-201ENST00000563759 H7C1W4 665 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms