RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 CNTROBQ8N137 903 aa11.27□□□□□ -0.61
HERC2-203ENST00000563670 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
HERC2-203ENST00000563670 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
HERC2-203ENST00000563670 SCN4AP35499 1836 aa11.26□□□□□ -0.61
HERC2-203ENST00000563670 HMOX1P09601 288 aa11.26□□□□□ -0.61
HERC2-203ENST00000563670 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
HERC2-203ENST00000563670 ITPK1Q13572 414 aa11.26□□□□□ -0.61
HERC2-203ENST00000563670 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
HERC2-203ENST00000563670 PLEKHO1Q53GL0 409 aaPredicted RBP11.26□□□□□ -0.61
HERC2-203ENST00000563670 PNNQ9H307 717 aaKnown RBP11.26□□□□□ -0.61
HERC2-203ENST00000563670 DDX21Q9NR30 783 aaKnown RBP eCLIP11.26□□□□□ -0.61
HERC2-203ENST00000563670 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
HERC2-203ENST00000563670 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
HERC2-203ENST00000563670 AOC2O75106 756 aa11.25□□□□□ -0.61
HERC2-203ENST00000563670 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
HERC2-203ENST00000563670 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
HERC2-203ENST00000563670 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
HERC2-203ENST00000563670 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
HERC2-203ENST00000563670 DDR1Q08345 913 aa11.24□□□□□ -0.61
HERC2-203ENST00000563670 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
HERC2-203ENST00000563670 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
HERC2-203ENST00000563670 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
HERC2-203ENST00000563670 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
HERC2-203ENST00000563670 RFC4P35249 363 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 GRM1Q13255 1194 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 EAPPQ56P03 285 aaPredicted RBP11.23□□□□□ -0.61
HERC2-203ENST00000563670 PNMA8AQ86V59 439 aaPredicted RBP11.23□□□□□ -0.61
HERC2-203ENST00000563670 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
HERC2-203ENST00000563670 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 TLL2Q9Y6L7 1015 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 LTBP3Q9NS15 1303 aa11.23□□□□□ -0.61
HERC2-203ENST00000563670 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
HERC2-203ENST00000563670 KDRP35968 1356 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 GSE1Q14687 1217 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
HERC2-203ENST00000563670 PIGBQ92521 554 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 COL6A3P12111 3177 aa11.22□□□□□ -0.61
HERC2-203ENST00000563670 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.61
HERC2-203ENST00000563670 MAPK8IP3Q9UPT6 1336 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 RC3H1Q5TC82 1133 aaKnown RBP11.21□□□□□ -0.61
HERC2-203ENST00000563670 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
HERC2-203ENST00000563670 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 HHIPL1Q96JK4 782 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
HERC2-203ENST00000563670 RGL2O15211 777 aa11.2□□□□□ -0.62
HERC2-203ENST00000563670 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
HERC2-203ENST00000563670 EPHX2P34913 555 aa11.2□□□□□ -0.62
HERC2-203ENST00000563670 GAS2L2Q8NHY3 880 aa11.2□□□□□ -0.62
HERC2-203ENST00000563670 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
HERC2-203ENST00000563670 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 ITGB4P16144 1822 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 POLRMTO00411 1230 aaKnown RBP11.19□□□□□ -0.62
HERC2-203ENST00000563670 CST9Q5W186 159 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
HERC2-203ENST00000563670 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
HERC2-203ENST00000563670 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
HERC2-203ENST00000563670 CNTNAP4Q9C0A0 1308 aa11.18□□□□□ -0.62
HERC2-203ENST00000563670 RPS6KA4O75676 772 aa11.18□□□□□ -0.62
HERC2-203ENST00000563670 PHKG2P15735 406 aa11.18□□□□□ -0.62
HERC2-203ENST00000563670 TM4SF1P30408 202 aa11.18□□□□□ -0.62
HERC2-203ENST00000563670 CYP27B1O15528 508 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
HERC2-203ENST00000563670 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
HERC2-203ENST00000563670 SCN11AQ9UI33 1791 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
HERC2-203ENST00000563670 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
HERC2-203ENST00000563670 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
HERC2-203ENST00000563670 PKN2Q16513 984 aaKnown RBP11.16□□□□□ -0.62
HERC2-203ENST00000563670 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
HERC2-203ENST00000563670 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
HERC2-203ENST00000563670 RUNDC1Q96C34 613 aa11.16□□□□□ -0.62
HERC2-203ENST00000563670 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
HERC2-203ENST00000563670 FER1L6Q2WGJ9 1857 aa11.16□□□□□ -0.62
HERC2-203ENST00000563670 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 NOGQ13253 232 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
HERC2-203ENST00000563670 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 FAM9BQ8IZU0 186 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 PHACTR3Q96KR7 559 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
HERC2-203ENST00000563670 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.63
HERC2-203ENST00000563670 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 C21orf2O43822 256 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 NUBP1P53384 320 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 CABP4P57796 275 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms