RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SOX12O15370 315 aa7.34□□□□□ -1.24
LINC01963-201ENST00000562038 IL6STP40189 918 aaPredicted RBP7.34□□□□□ -1.24
LINC01963-201ENST00000562038 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.24
LINC01963-201ENST00000562038 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 RPS6KA4O75676 772 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
LINC01963-201ENST00000562038 SIK1P57059 783 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 MYH3P11055 1940 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 RASSF10A6NK89 507 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 ERVV-1B6SEH8 477 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 NEFLP07196 543 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 SNRPA1P09661 255 aaKnown RBP7.33□□□□□ -1.24
LINC01963-201ENST00000562038 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
LINC01963-201ENST00000562038 EIF4A1P60842 406 aaKnown RBP7.33□□□□□ -1.24
LINC01963-201ENST00000562038 TGFB2P61812 414 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 TEFQ10587 303 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 PAXIP1Q6ZW49 1069 aaPredicted RBP7.33□□□□□ -1.24
LINC01963-201ENST00000562038 MYH16Q9H6N6 1097 aa7.33□□□□□ -1.24
LINC01963-201ENST00000562038 SRCAPQ6ZRS2 3230 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 ANKRD31Q8N7Z5 1873 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 E9PSI1 815 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 ZNF827Q17R98 1081 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 CLEC4GQ6UXB4 293 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 A0A1B0GUL6 1792 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 HMOX1P09601 288 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 RIPK4P57078 832 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 WWC1Q8IX03 1113 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 CYP19A1P11511 503 aaPredicted RBP7.32□□□□□ -1.24
LINC01963-201ENST00000562038 ARID3AQ99856 593 aa7.32□□□□□ -1.24
LINC01963-201ENST00000562038 SYNGAP1Q96PV0 1343 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 STARD3NLO95772 234 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 ALDH1L2Q3SY69 923 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 BTBD11A6QL63 1104 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 TTC5Q8N0Z6 440 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 AIDAQ96BJ3 306 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 CCDC87Q9NVE4 849 aa7.31□□□□□ -1.24
LINC01963-201ENST00000562038 MAP2K1Q02750 393 aaPredicted RBP7.3□□□□□ -1.24
LINC01963-201ENST00000562038 LRP10Q7Z4F1 713 aa7.3□□□□□ -1.24
LINC01963-201ENST00000562038 AK7Q96M32 723 aa7.3□□□□□ -1.24
LINC01963-201ENST00000562038 CCNL1Q9UK58 526 aaPredicted RBP7.3□□□□□ -1.24
LINC01963-201ENST00000562038 CCDC88AQ3V6T2 1871 aa7.3□□□□□ -1.24
LINC01963-201ENST00000562038 EIF5P55010 431 aaKnown RBP7.3□□□□□ -1.24
LINC01963-201ENST00000562038 DDX54Q8TDD1 881 aaKnown RBP7.3□□□□□ -1.24
LINC01963-201ENST00000562038 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
LINC01963-201ENST00000562038 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
LINC01963-201ENST00000562038 COL11A2P13942 1736 aaPredicted RBP7.29□□□□□ -1.24
LINC01963-201ENST00000562038 TRIM28Q13263 835 aaKnown RBP7.29□□□□□ -1.24
LINC01963-201ENST00000562038 USP42Q9H9J4 1324 aaKnown RBP7.29□□□□□ -1.24
LINC01963-201ENST00000562038 RTL9Q8NET4 1388 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 ARAP2Q8WZ64 1704 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 HABP4Q5JVS0 413 aaKnown RBP7.29□□□□□ -1.24
LINC01963-201ENST00000562038 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 NFATC2IPQ8NCF5 419 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 LINC00116Q8NCU8 138 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 HHIPL1Q96JK4 782 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 USP35Q9P2H5 1018 aa7.29□□□□□ -1.24
LINC01963-201ENST00000562038 ZNF646O15015 1829 aaPredicted RBP7.28□□□□□ -1.24
LINC01963-201ENST00000562038 SLFN5Q08AF3 891 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 PSME4Q14997 1843 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 HSP90AB3PQ58FF7 597 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 SLC4A9Q96Q91 983 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 HYPKQ9NX55 129 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 NARFQ9UHQ1 456 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 BRPF3Q9ULD4 1205 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 ZNF609O15014 1411 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 ITPK1Q13572 414 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 GRIPAP1Q4V328 841 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 C16orf71Q8IYS4 520 aaPredicted RBP7.28□□□□□ -1.24
LINC01963-201ENST00000562038 C1orf115Q9H7X2 142 aa7.28□□□□□ -1.24
LINC01963-201ENST00000562038 PTPRCP08575 1304 aa7.27□□□□□ -1.24
LINC01963-201ENST00000562038 DDX21Q9NR30 783 aaKnown RBP eCLIP7.27□□□□□ -1.24
LINC01963-201ENST00000562038 LRRC4BQ9NT99 713 aa7.27□□□□□ -1.24
LINC01963-201ENST00000562038 APAF1O14727 1248 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 ASAP1Q9ULH1 1129 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 SSC5DA1L4H1 1573 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 CARMIL3Q8ND23 1372 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 FANCIQ9NVI1 1328 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 A0A0G2JS52 829 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 A0A0U1RQG5 324 aaPredicted RBP7.27□□□□□ -1.25
LINC01963-201ENST00000562038 KLRG2A4D1S0 409 aaPredicted RBP7.27□□□□□ -1.25
LINC01963-201ENST00000562038 HSP90B1P14625 803 aaKnown RBP7.27□□□□□ -1.25
LINC01963-201ENST00000562038 GOLGA2Q08379 1002 aa7.27□□□□□ -1.25
LINC01963-201ENST00000562038 CRKLP46109 303 aaKnown RBP7.26□□□□□ -1.25
LINC01963-201ENST00000562038 CCDC184Q52MB2 194 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 GPR153Q6NV75 609 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 NLGN1Q8N2Q7 840 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 ZNF496Q96IT1 587 aaPredicted RBP7.26□□□□□ -1.25
LINC01963-201ENST00000562038 MBIPQ9NS73 344 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 DBF4Q9UBU7 674 aaPredicted RBP7.26□□□□□ -1.25
LINC01963-201ENST00000562038 TSPYL4Q9UJ04 414 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 ZNF652Q9Y2D9 606 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 TNRC18O15417 2968 aaPredicted RBP7.26□□□□□ -1.25
LINC01963-201ENST00000562038 ATP6V1AP38606 617 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 PARP10Q53GL7 1025 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 CCDC30Q5VVM6 783 aa7.26□□□□□ -1.25
LINC01963-201ENST00000562038 RTCBQ9Y3I0 505 aaKnown RBP7.26□□□□□ -1.25
LINC01963-201ENST00000562038 PDIA6Q15084 440 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 CDHR2Q9BYE9 1310 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms