RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
PSME1-208ENST00000561059 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
PSME1-208ENST00000561059 BCORQ6W2J9 1755 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 PCNTO95613 3336 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 TIAM2Q8IVF5 1701 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 FSTL1Q12841 308 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 HLFQ16534 295 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
PSME1-208ENST00000561059 NIP7Q9Y221 180 aaKnown RBP eCLIP17.79■□□□□ 0.44
PSME1-208ENST00000561059 TNRC6CQ9HCJ0 1690 aaKnown RBP17.79■□□□□ 0.44
PSME1-208ENST00000561059 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
PSME1-208ENST00000561059 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
PSME1-208ENST00000561059 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.44
PSME1-208ENST00000561059 POTECB2RU33 542 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
PSME1-208ENST00000561059 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 CNKSR1Q969H4 720 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 MASTLQ96GX5 879 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
PSME1-208ENST00000561059 CLEC4GQ6UXB4 293 aa17.76■□□□□ 0.43
PSME1-208ENST00000561059 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
PSME1-208ENST00000561059 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
PSME1-208ENST00000561059 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
PSME1-208ENST00000561059 NEFMP07197 916 aa17.75■□□□□ 0.43
PSME1-208ENST00000561059 MYL6BP14649 208 aa17.75■□□□□ 0.43
PSME1-208ENST00000561059 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
PSME1-208ENST00000561059 CACNA1SQ13698 1873 aa17.75■□□□□ 0.43
PSME1-208ENST00000561059 DDNO94850 711 aaPredicted RBP17.74■□□□□ 0.43
PSME1-208ENST00000561059 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
PSME1-208ENST00000561059 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
PSME1-208ENST00000561059 EIF4A1P60842 406 aaKnown RBP17.73■□□□□ 0.43
PSME1-208ENST00000561059 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
PSME1-208ENST00000561059 TTLL7Q6ZT98 887 aa17.73■□□□□ 0.43
PSME1-208ENST00000561059 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
PSME1-208ENST00000561059 FER1L6Q2WGJ9 1857 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 NPR1P16066 1061 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 GPTP24298 496 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 ZNF277Q9NRM2 450 aaPredicted RBP17.72■□□□□ 0.43
PSME1-208ENST00000561059 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
PSME1-208ENST00000561059 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
PSME1-208ENST00000561059 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
PSME1-208ENST00000561059 SLC51AQ86UW1 340 aa17.71■□□□□ 0.43
PSME1-208ENST00000561059 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
PSME1-208ENST00000561059 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
PSME1-208ENST00000561059 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
PSME1-208ENST00000561059 PNISRQ8TF01 805 aaKnown RBP17.7■□□□□ 0.42
PSME1-208ENST00000561059 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
PSME1-208ENST00000561059 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 KLRG2A4D1S0 409 aaPredicted RBP17.68■□□□□ 0.42
PSME1-208ENST00000561059 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
PSME1-208ENST00000561059 ANXA1P04083 346 aa17.67■□□□□ 0.42
PSME1-208ENST00000561059 EIF2S2P20042 333 aaKnown RBP17.67■□□□□ 0.42
PSME1-208ENST00000561059 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSME1-208ENST00000561059 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
PSME1-208ENST00000561059 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
PSME1-208ENST00000561059 RIPK4P57078 832 aa17.66■□□□□ 0.42
PSME1-208ENST00000561059 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
PSME1-208ENST00000561059 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
PSME1-208ENST00000561059 JMYQ8N9B5 988 aa17.66■□□□□ 0.42
PSME1-208ENST00000561059 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
PSME1-208ENST00000561059 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
PSME1-208ENST00000561059 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
PSME1-208ENST00000561059 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
PSME1-208ENST00000561059 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
PSME1-208ENST00000561059 DICER1Q9UPY3 1922 aaKnown RBP17.64■□□□□ 0.42
PSME1-208ENST00000561059 RGL2O15211 777 aa17.64■□□□□ 0.41
PSME1-208ENST00000561059 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
PSME1-208ENST00000561059 COL13A1Q5TAT6 717 aaPredicted RBP17.64■□□□□ 0.41
PSME1-208ENST00000561059 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
PSME1-208ENST00000561059 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
PSME1-208ENST00000561059 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
PSME1-208ENST00000561059 ALDH1B1P30837 517 aa17.63■□□□□ 0.41
PSME1-208ENST00000561059 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
PSME1-208ENST00000561059 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
PSME1-208ENST00000561059 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
PSME1-208ENST00000561059 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
PSME1-208ENST00000561059 PDIA6Q15084 440 aa17.62■□□□□ 0.41
PSME1-208ENST00000561059 KRT24Q2M2I5 525 aa17.62■□□□□ 0.41
PSME1-208ENST00000561059 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
PSME1-208ENST00000561059 EAPPQ56P03 285 aaPredicted RBP17.62■□□□□ 0.41
PSME1-208ENST00000561059 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
PSME1-208ENST00000561059 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
PSME1-208ENST00000561059 TAF1DQ9H5J8 278 aaPredicted RBP17.62■□□□□ 0.41
PSME1-208ENST00000561059 NTSR2O95665 410 aa17.61■□□□□ 0.41
PSME1-208ENST00000561059 RALBP1Q15311 655 aa17.61■□□□□ 0.41
PSME1-208ENST00000561059 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms