RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 TRIM21P19474 475 aaKnown RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 RBM27Q9P2N5 1060 aaKnown RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 HYPKQ9NX55 129 aa14.61□□□□□ -0.07
SYNM-203ENST00000560674 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 PTCD1O75127 700 aaKnown RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 SLC5A1P13866 664 aa14.61□□□□□ -0.07
SYNM-203ENST00000560674 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 CCDC150Q8NCX0 1101 aa14.61□□□□□ -0.07
SYNM-203ENST00000560674 BCCIPQ9P287 314 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYNM-203ENST00000560674 DYNC1I1O14576 645 aa14.61□□□□□ -0.07
SYNM-203ENST00000560674 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 MTIF2P46199 727 aaKnown RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
SYNM-203ENST00000560674 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
SYNM-203ENST00000560674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYNM-203ENST00000560674 FLIIQ13045 1269 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 ZSCAN23Q3MJ62 389 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 NME9Q86XW9 330 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 PRIMPOLQ96LW4 560 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 DBF4Q9UBU7 674 aaPredicted RBP14.6□□□□□ -0.07
SYNM-203ENST00000560674 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
SYNM-203ENST00000560674 GTF2F1P35269 517 aaKnown RBP eCLIP14.6□□□□□ -0.07
SYNM-203ENST00000560674 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 CRACR2BQ8N4Y2 399 aaPredicted RBP14.6□□□□□ -0.07
SYNM-203ENST00000560674 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
SYNM-203ENST00000560674 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 ZNF444Q8N0Y2 327 aaPredicted RBP14.6□□□□□ -0.07
SYNM-203ENST00000560674 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
SYNM-203ENST00000560674 WAPLQ7Z5K2 1190 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 A0A087WZG4 1122 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 ANAPC15P60006 121 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 CTR9Q6PD62 1173 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 USP16Q9Y5T5 823 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 CDK13Q14004 1512 aaKnown RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 RAPGEF3O95398 923 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
SYNM-203ENST00000560674 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 HMG20BQ9P0W2 317 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 EPRSP07814 1512 aaKnown RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 CTNNBL1Q8WYA6 563 aaPredicted RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
SYNM-203ENST00000560674 TAOK3Q9H2K8 898 aa14.59□□□□□ -0.07
SYNM-203ENST00000560674 KANK3Q6NY19 840 aa14.58□□□□□ -0.07
SYNM-203ENST00000560674 IFT140Q96RY7 1462 aa14.58□□□□□ -0.07
SYNM-203ENST00000560674 IGHDP01880 384 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 AMPD3Q01432 767 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 DNAI2Q9GZS0 605 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 CCDC175P0C221 793 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
SYNM-203ENST00000560674 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.58□□□□□ -0.08
SYNM-203ENST00000560674 PPP4R3AQ6IN85 833 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
SYNM-203ENST00000560674 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 CCDC171Q6TFL3 1326 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 IBSPP21815 317 aaPredicted RBP14.57□□□□□ -0.08
SYNM-203ENST00000560674 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 CALML4Q96GE6 196 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 CUL5Q93034 780 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
SYNM-203ENST00000560674 TCP11L1Q9NUJ3 509 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 NSD2O96028 1365 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 HOOK3Q86VS8 718 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 GOLIM4O00461 696 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 HCLS1P14317 486 aaPredicted RBP14.57□□□□□ -0.08
SYNM-203ENST00000560674 CCDC40Q4G0X9 1142 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
SYNM-203ENST00000560674 TMCO5BA8MYB1 307 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 GNG11P61952 73 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 TTF1Q15361 905 aaPredicted RBP14.56□□□□□ -0.08
SYNM-203ENST00000560674 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 CCDC12Q8WUD4 166 aaPredicted RBP14.56□□□□□ -0.08
SYNM-203ENST00000560674 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 ZSCAN22P10073 491 aaPredicted RBP14.56□□□□□ -0.08
SYNM-203ENST00000560674 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
SYNM-203ENST00000560674 MACROD2A1Z1Q3 448 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 CETN1Q12798 172 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 TMX3Q96JJ7 454 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 MRC2Q9UBG0 1479 aa14.56□□□□□ -0.08
SYNM-203ENST00000560674 CAMSAP2Q08AD1 1489 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 LMAN1P49257 510 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 METAP2P50579 478 aaKnown RBP eCLIP14.55□□□□□ -0.08
SYNM-203ENST00000560674 GIMAP6Q6P9H5 292 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 EHBP1Q8NDI1 1231 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 MAP3K2Q9Y2U5 619 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
SYNM-203ENST00000560674 ANKIB1Q9P2G1 1089 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms