RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, human

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-208	ENST00000560509	ATP2B1	P20020	1258 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	COG6	Q9Y2V7	657 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	ARHGAP23	Q9P227	1491 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	APP	P05067	770 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	TMEM132E	Q6IEE7	984 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	TRMT2A	Q8IZ69	625 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	CCDC102A	Q96A19	550 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	DDX27	Q96GQ7	796 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	PLEKHG3	A1L390	1219 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	LONRF3	Q496Y0	759 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	CC2D1B	Q5T0F9	858 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	ITFG2	Q969R8	447 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	CEP89	Q96ST8	783 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	MRS2	Q9HD23	443 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	BSDC1	Q9NW68	430 aa	Predicted RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	SMC3	Q9UQE7	1217 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	C3	P01024	1663 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	ROBO1	Q9Y6N7	1651 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	CCDC144A	A2RUR9	1427 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	ADGRB3	O60242	1522 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	EFCAB6	Q5THR3	1501 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	DLC1	Q96QB1	1528 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	HDGF	P51858	240 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	SATB1	Q01826	763 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	EN1	Q05925	392 aa	Predicted RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	PUS10	Q3MIT2	529 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	MSL3	Q8N5Y2	521 aa	Known RBP	4.55	□□□□□ -1.68
BLM-208	ENST00000560509	SYT17	Q9BSW7	474 aa		4.55	□□□□□ -1.68
BLM-208	ENST00000560509	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	MLH3	Q9UHC1	1453 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	GABBR2	O75899	941 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	CLCN1	P35523	988 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	RBM5	P52756	815 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	PSME1	Q06323	249 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	AMHR2	Q16671	573 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	WASHC4	Q2M389	1173 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NBPF6	Q5VWK0	638 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NBPF4	Q96M43	638 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	TMX4	Q9H1E5	349 aa	Predicted RBP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	STRCP1	A6NGW2	1772 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	ERVK-7	P63135	1459 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NPC1L1	Q9UHC9	1359 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	C11orf91	Q3C1V1	193 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	DUSP27	Q5VZP5	1158 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	SMC5	Q8IY18	1101 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NBPF15	Q8N660	670 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	GLMN	Q92990	594 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	PDZRN3	Q9UPQ7	1066 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	TRAK1	Q9UPV9	953 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	WDHD1	O75717	1129 aa	Predicted RBP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	KIF4A	O95239	1232 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	HSP90AB1	P08238	724 aa	Known RBP	4.54	□□□□□ -1.68
BLM-208	ENST00000560509	RIPK4	P57078	832 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	VPS37D	Q86XT2	251 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	PRDM6	Q9NQX0	595 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	POGK	Q9P215	609 aa		4.54	□□□□□ -1.68
BLM-208	ENST00000560509	NPHP4	O75161	1426 aa	Predicted RBP	4.53	□□□□□ -1.68
BLM-208	ENST00000560509	KDM2B	Q8NHM5	1336 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	UGGT1	Q9NYU2	1555 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	TNR	Q92752	1358 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	NAT2	P11245	290 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PDAP1	Q13442	181 aa	Known RBP	4.53	□□□□□ -1.68
BLM-208	ENST00000560509	SETDB1	Q15047	1291 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	CHADL	Q6NUI6	762 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PARP9	Q8IXQ6	854 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PNMA1	Q8ND90	353 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	TULP2	O00295	520 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	COL9A1	P20849	921 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	NEXN	Q0ZGT2	675 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PTPRO	Q16827	1216 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	ZKSCAN2	Q63HK3	967 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	POM121	Q96HA1	1249 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PLEKHH1	Q9ULM0	1364 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	FCHSD2	O94868	740 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	CD151	P48509	253 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	DNAJC21	Q5F1R6	531 aa	Known RBP	4.53	□□□□□ -1.68
BLM-208	ENST00000560509	CFAP70	Q5T0N1	1121 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	TTC30B	Q8N4P2	665 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	CARD11	Q9BXL7	1154 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	UNC79	Q9P2D8	2635 aa		4.53	□□□□□ -1.68
BLM-208	ENST00000560509	PIK3C2G	O75747	1445 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	TBC1D12	O60347	775 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	CASC1	Q6TDU7	716 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	TCEAL9	Q9UHQ7	104 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	KAT6B	Q8WYB5	2073 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	FAM200B	P0CF97	657 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	KCNV1	Q6PIU1	500 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	DPH6	Q7L8W6	267 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	C11orf96	Q7Z7L8	435 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.52	□□□□□ -1.69
BLM-208	ENST00000560509	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.52	□□□□□ -1.69
BLM-208	ENST00000560509	WDR90	Q96KV7	1748 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	SHANK3	Q9BYB0	1731 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	GNPAT	O15228	680 aa		4.52	□□□□□ -1.69
BLM-208	ENST00000560509	LMOD1	P29536	600 aa	Predicted RBP	4.52	□□□□□ -1.69
BLM-208	ENST00000560509	ZFYVE27	Q5T4F4	411 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms