RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 NCOA4Q13772 614 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 DOC2BQ14184 412 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 WWC1Q8IX03 1113 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 L3MBTL2Q969R5 705 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 PRDM6Q9NQX0 595 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 STRN4Q9NRL3 753 aa7.51□□□□□ -1.21
AP3S2-210ENST00000559601 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
AP3S2-210ENST00000559601 PCBP4P57723 403 aaKnown RBP7.5□□□□□ -1.21
AP3S2-210ENST00000559601 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
AP3S2-210ENST00000559601 PLEKHM2Q8IWE5 1019 aa7.5□□□□□ -1.21
AP3S2-210ENST00000559601 TNFRSF25Q93038 417 aa7.5□□□□□ -1.21
AP3S2-210ENST00000559601 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
AP3S2-210ENST00000559601 M0R2N6 131 aa7.49□□□□□ -1.21
AP3S2-210ENST00000559601 ALAS2P22557 587 aa7.49□□□□□ -1.21
AP3S2-210ENST00000559601 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
AP3S2-210ENST00000559601 SLC9A9Q8IVB4 645 aa7.49□□□□□ -1.21
AP3S2-210ENST00000559601 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
AP3S2-210ENST00000559601 KCNQ4P56696 695 aa7.48□□□□□ -1.21
AP3S2-210ENST00000559601 SYT9Q86SS6 491 aa7.48□□□□□ -1.21
AP3S2-210ENST00000559601 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
AP3S2-210ENST00000559601 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
AP3S2-210ENST00000559601 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
AP3S2-210ENST00000559601 SERTM1A2A2V5 107 aa7.47□□□□□ -1.21
AP3S2-210ENST00000559601 ATP1A2P50993 1020 aa7.47□□□□□ -1.21
AP3S2-210ENST00000559601 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
AP3S2-210ENST00000559601 PSME1Q06323 249 aa7.47□□□□□ -1.21
AP3S2-210ENST00000559601 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.22
AP3S2-210ENST00000559601 GATA4P43694 442 aa7.45□□□□□ -1.22
AP3S2-210ENST00000559601 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
AP3S2-210ENST00000559601 FOXD4L6Q3SYB3 417 aaPredicted RBP7.45□□□□□ -1.22
AP3S2-210ENST00000559601 FOXD4L3Q6VB84 417 aaPredicted RBP7.45□□□□□ -1.22
AP3S2-210ENST00000559601 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
AP3S2-210ENST00000559601 ZBTB7BO15156 539 aaPredicted RBP7.44□□□□□ -1.22
AP3S2-210ENST00000559601 NEUROD1Q13562 356 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 PRRT3Q5FWE3 981 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 TNS4Q8IZW8 715 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 LARGE2Q8N3Y3 721 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 EFCC1Q9HA90 598 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 NEUROD4Q9HD90 331 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
AP3S2-210ENST00000559601 SIX5Q8N196 739 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 STAG2Q8N3U4 1231 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 KRTAP9-9Q9BYP9 154 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 CHMP3Q9Y3E7 222 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 STARD13Q9Y3M8 1113 aa7.43□□□□□ -1.22
AP3S2-210ENST00000559601 USP17L3A6NCW0 530 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 USP17L4A6NCW7 530 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 RAD21O60216 631 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 CLDN10P78369 228 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 SPEM2Q0P670 501 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
AP3S2-210ENST00000559601 FLIIQ13045 1269 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 USP17L1Q7RTZ2 530 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 DEPDC4Q8N2C3 294 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 TPCN2Q8NHX9 752 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 ADAMTS19Q8TE59 1207 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 NACC1Q96RE7 527 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
AP3S2-210ENST00000559601 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
AP3S2-210ENST00000559601 M0R082 166 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 ATP9BO43861 1147 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 NID1P14543 1247 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 TYRO3Q06418 890 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 SH3PXD2AQ5TCZ1 1133 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 UCN2Q96RP3 112 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 ZNF587Q96SQ5 575 aaPredicted RBP7.41□□□□□ -1.22
AP3S2-210ENST00000559601 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
AP3S2-210ENST00000559601 BRD7Q9NPI1 651 aa7.41□□□□□ -1.22
AP3S2-210ENST00000559601 APBA3O96018 575 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 ALBP02768 609 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 ADH7P40394 386 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 HIF1AQ16665 826 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
AP3S2-210ENST00000559601 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 TBCELQ5QJ74 424 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 C20orf204Q6ZNR8 217 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
AP3S2-210ENST00000559601 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 DKK1O94907 266 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 ZFP64Q9NPA5 681 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 KCNH4Q9UQ05 1017 aa7.39□□□□□ -1.23
AP3S2-210ENST00000559601 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
AP3S2-210ENST00000559601 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
AP3S2-210ENST00000559601 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
AP3S2-210ENST00000559601 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
AP3S2-210ENST00000559601 ARTNQ5T4W7 220 aa7.37□□□□□ -1.23
AP3S2-210ENST00000559601 IER5Q5VY09 327 aa7.37□□□□□ -1.23
AP3S2-210ENST00000559601 C21orf2O43822 256 aa7.36□□□□□ -1.23
AP3S2-210ENST00000559601 UBTFP17480 764 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms