RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ADRA2BP18089 450 aa21.01■□□□□ 0.95
TPM1-219ENST00000559397 TRAPPC3LQ5T215 181 aa21.01■□□□□ 0.95
TPM1-219ENST00000559397 ARHGEF1Q92888 912 aaKnown RBP21.01■□□□□ 0.95
TPM1-219ENST00000559397 TFCP2L1Q9NZI6 479 aa21.01■□□□□ 0.95
TPM1-219ENST00000559397 A0A087WZG4 1122 aa21■□□□□ 0.95
TPM1-219ENST00000559397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
TPM1-219ENST00000559397 MS4A1P11836 297 aa21■□□□□ 0.95
TPM1-219ENST00000559397 RLBP1P12271 317 aa21■□□□□ 0.95
TPM1-219ENST00000559397 PTPRCP08575 1304 aa21■□□□□ 0.95
TPM1-219ENST00000559397 PHF14O94880 888 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 TBC1D2BQ9UPU7 963 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 TNNQ9UQP3 1299 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 FKBP5Q13451 457 aaPredicted RBP20.99■□□□□ 0.95
TPM1-219ENST00000559397 ATF7IPQ6VMQ6 1270 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 NPM2Q86SE8 214 aaKnown RBP20.99■□□□□ 0.95
TPM1-219ENST00000559397 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
TPM1-219ENST00000559397 ARHGAP45Q92619 1136 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 PNPLA7Q6ZV29 1317 aa20.99■□□□□ 0.95
TPM1-219ENST00000559397 IPO8O15397 1037 aaKnown RBP20.98■□□□□ 0.95
TPM1-219ENST00000559397 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
TPM1-219ENST00000559397 MAP3K15Q6ZN16 1313 aa20.98■□□□□ 0.95
TPM1-219ENST00000559397 ADCY9O60503 1353 aa20.98■□□□□ 0.95
TPM1-219ENST00000559397 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 DDX58O95786 925 aaKnown RBP20.97■□□□□ 0.95
TPM1-219ENST00000559397 TRIM27P14373 513 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 KSR2Q6VAB6 950 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 DZIP1LQ8IYY4 767 aaKnown RBP20.97■□□□□ 0.95
TPM1-219ENST00000559397 NARFQ9UHQ1 456 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 COG6Q9Y2V7 657 aa20.97■□□□□ 0.95
TPM1-219ENST00000559397 PI4KAP2A4QPH2 592 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 AAMPQ13685 434 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
TPM1-219ENST00000559397 PI4KAP1Q8N8J0 262 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 FLAD1Q8NFF5 587 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 ARXQ96QS3 562 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 ARFGEF2Q9Y6D5 1785 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 SCN7AQ01118 1682 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 ERVV-1B6SEH8 477 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 ZBTB3Q9H5J0 574 aa20.96■□□□□ 0.95
TPM1-219ENST00000559397 SOCS7O14512 581 aa20.95■□□□□ 0.94
TPM1-219ENST00000559397 RFC4P35249 363 aa20.95■□□□□ 0.94
TPM1-219ENST00000559397 RIC3Q7Z5B4 369 aa20.95■□□□□ 0.94
TPM1-219ENST00000559397 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
TPM1-219ENST00000559397 NUP98P52948 1817 aa20.94■□□□□ 0.94
TPM1-219ENST00000559397 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
TPM1-219ENST00000559397 F6X3S4 739 aa20.94■□□□□ 0.94
TPM1-219ENST00000559397 HLFQ16534 295 aa20.94■□□□□ 0.94
TPM1-219ENST00000559397 API5Q9BZZ5 524 aaKnown RBP20.94■□□□□ 0.94
TPM1-219ENST00000559397 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
TPM1-219ENST00000559397 MAP3K2Q9Y2U5 619 aa20.94■□□□□ 0.94
TPM1-219ENST00000559397 MVPQ14764 893 aaKnown RBP20.93■□□□□ 0.94
TPM1-219ENST00000559397 USPL1Q5W0Q7 1092 aa20.93■□□□□ 0.94
TPM1-219ENST00000559397 CLUAP1Q96AJ1 413 aa20.93■□□□□ 0.94
TPM1-219ENST00000559397 RGL2O15211 777 aa20.93■□□□□ 0.94
TPM1-219ENST00000559397 ZPR1O75312 459 aa20.93■□□□□ 0.94
TPM1-219ENST00000559397 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
TPM1-219ENST00000559397 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
TPM1-219ENST00000559397 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
TPM1-219ENST00000559397 METTL22Q9BUU2 404 aaPredicted RBP20.92■□□□□ 0.94
TPM1-219ENST00000559397 ABCC4O15439 1325 aa20.91■□□□□ 0.94
TPM1-219ENST00000559397 CLEC4GQ6UXB4 293 aa20.91■□□□□ 0.94
TPM1-219ENST00000559397 GYS1P13807 737 aa20.9■□□□□ 0.94
TPM1-219ENST00000559397 PDGFDQ9GZP0 370 aaPredicted RBP20.9■□□□□ 0.94
TPM1-219ENST00000559397 PXDNLA1KZ92 1463 aa20.9■□□□□ 0.94
TPM1-219ENST00000559397 KDM2BQ8NHM5 1336 aa20.9■□□□□ 0.94
TPM1-219ENST00000559397 ANKRD36CQ5JPF3 1778 aa20.89■□□□□ 0.94
TPM1-219ENST00000559397 MSH5O43196 834 aa20.89■□□□□ 0.93
TPM1-219ENST00000559397 TCIRG1Q13488 830 aa20.89■□□□□ 0.93
TPM1-219ENST00000559397 MYD88Q99836 296 aa20.89■□□□□ 0.93
TPM1-219ENST00000559397 ZNF652Q9Y2D9 606 aa20.89■□□□□ 0.93
TPM1-219ENST00000559397 N4BP2Q86UW6 1770 aaPredicted RBP20.89■□□□□ 0.93
TPM1-219ENST00000559397 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 CASZ1Q86V15 1759 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
TPM1-219ENST00000559397 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 BEND3Q5T5X7 828 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 ISCA1Q9BUE6 129 aa20.88■□□□□ 0.93
TPM1-219ENST00000559397 IGKV5-2P06315 115 aa20.87■□□□□ 0.93
TPM1-219ENST00000559397 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
TPM1-219ENST00000559397 ZNF34Q8IZ26 560 aa20.86■□□□□ 0.93
TPM1-219ENST00000559397 DDX19BQ9UMR2 479 aa20.86■□□□□ 0.93
TPM1-219ENST00000559397 ATP5J2-PTCD1G3V325 749 aa20.86■□□□□ 0.93
TPM1-219ENST00000559397 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
TPM1-219ENST00000559397 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
TPM1-219ENST00000559397 LINS1Q8NG48 757 aa20.86■□□□□ 0.93
TPM1-219ENST00000559397 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
TPM1-219ENST00000559397 TRIM28Q13263 835 aaKnown RBP20.85■□□□□ 0.93
TPM1-219ENST00000559397 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
TPM1-219ENST00000559397 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
TPM1-219ENST00000559397 NEURL1BA8MQ27 555 aa20.84■□□□□ 0.93
TPM1-219ENST00000559397 CCT4P50991 539 aaKnown RBP20.84■□□□□ 0.93
TPM1-219ENST00000559397 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
TPM1-219ENST00000559397 SRCIN1Q9C0H9 1055 aa20.84■□□□□ 0.93
TPM1-219ENST00000559397 UBN2Q6ZU65 1347 aa20.84■□□□□ 0.93
TPM1-219ENST00000559397 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.93
TPM1-219ENST00000559397 GPTP24298 496 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms