RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZBTB7AO95365 584 aa27.19■■□□□ 1.94
CASC4-204ENST00000557945 FLIIQ13045 1269 aa27.19■■□□□ 1.94
CASC4-204ENST00000557945 SLC16A10Q8TF71 515 aa27.19■■□□□ 1.94
CASC4-204ENST00000557945 GYS1P13807 737 aa27.18■■□□□ 1.94
CASC4-204ENST00000557945 MSL1Q68DK7 614 aa27.18■■□□□ 1.94
CASC4-204ENST00000557945 DDX58O95786 925 aaKnown RBP27.17■■□□□ 1.94
CASC4-204ENST00000557945 ANKRD13DQ6ZTN6 518 aa27.17■■□□□ 1.94
CASC4-204ENST00000557945 ZNF652Q9Y2D9 606 aa27.17■■□□□ 1.94
CASC4-204ENST00000557945 ERVV-1B6SEH8 477 aa27.16■■□□□ 1.94
CASC4-204ENST00000557945 FKBP5Q13451 457 aaPredicted RBP27.16■■□□□ 1.94
CASC4-204ENST00000557945 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
CASC4-204ENST00000557945 FKBP8Q14318 412 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 HLFQ16534 295 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 RIC3Q7Z5B4 369 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 PLBD2Q8NHP8 589 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 BCL2L12Q9HB09 334 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 CACNA1FO60840 1977 aa27.15■■□□□ 1.94
CASC4-204ENST00000557945 BCAR3O75815 825 aa27.14■■□□□ 1.94
CASC4-204ENST00000557945 NLGN1Q8N2Q7 840 aa27.14■■□□□ 1.94
CASC4-204ENST00000557945 MTFR1LQ9H019 292 aa27.14■■□□□ 1.94
CASC4-204ENST00000557945 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
CASC4-204ENST00000557945 RCAN3Q9UKA8 241 aa27.13■■□□□ 1.93
CASC4-204ENST00000557945 CLEC4GQ6UXB4 293 aa27.12■■□□□ 1.93
CASC4-204ENST00000557945 SCN7AQ01118 1682 aa27.12■■□□□ 1.93
CASC4-204ENST00000557945 PI4KAP2A4QPH2 592 aa27.11■■□□□ 1.93
CASC4-204ENST00000557945 KSR2Q6VAB6 950 aa27.11■■□□□ 1.93
CASC4-204ENST00000557945 GIGYF2Q6Y7W6 1299 aaKnown RBP27.11■■□□□ 1.93
CASC4-204ENST00000557945 BICDL1Q6ZP65 573 aa27.11■■□□□ 1.93
CASC4-204ENST00000557945 PI4KAP1Q8N8J0 262 aa27.11■■□□□ 1.93
CASC4-204ENST00000557945 NOB1Q9ULX3 412 aaKnown RBP27.1■■□□□ 1.93
CASC4-204ENST00000557945 MAP3K2Q9Y2U5 619 aa27.1■■□□□ 1.93
CASC4-204ENST00000557945 BCORQ6W2J9 1755 aa27.1■■□□□ 1.93
CASC4-204ENST00000557945 RGL2O15211 777 aa27.09■■□□□ 1.93
CASC4-204ENST00000557945 BRPF1P55201 1214 aaPredicted RBP27.09■■□□□ 1.93
CASC4-204ENST00000557945 TBC1D9BQ66K14 1250 aa27.09■■□□□ 1.93
CASC4-204ENST00000557945 PTPRCP08575 1304 aa27.09■■□□□ 1.93
CASC4-204ENST00000557945 KIF16BQ96L93 1317 aa27.09■■□□□ 1.93
CASC4-204ENST00000557945 FRAT1Q92837 279 aaPredicted RBP27.09■■□□□ 1.93
CASC4-204ENST00000557945 ADCY9O60503 1353 aa27.08■■□□□ 1.93
CASC4-204ENST00000557945 GPTP24298 496 aa27.08■■□□□ 1.93
CASC4-204ENST00000557945 NFIXQ14938 502 aa27.08■■□□□ 1.93
CASC4-204ENST00000557945 HSP90AB3PQ58FF7 597 aa27.08■■□□□ 1.93
CASC4-204ENST00000557945 NIP7Q9Y221 180 aaKnown RBP eCLIP27.08■■□□□ 1.93
CASC4-204ENST00000557945 F6X3S4 739 aa27.07■■□□□ 1.92
CASC4-204ENST00000557945 MMP10P09238 476 aa27.07■■□□□ 1.92
CASC4-204ENST00000557945 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
CASC4-204ENST00000557945 SPON1Q9HCB6 807 aa27.07■■□□□ 1.92
CASC4-204ENST00000557945 POLD1P28340 1107 aa27.06■■□□□ 1.92
CASC4-204ENST00000557945 TCIRG1Q13488 830 aa27.06■■□□□ 1.92
CASC4-204ENST00000557945 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
CASC4-204ENST00000557945 MYD88Q99836 296 aa27.06■■□□□ 1.92
CASC4-204ENST00000557945 IPO8O15397 1037 aaKnown RBP27.05■■□□□ 1.92
CASC4-204ENST00000557945 TM4SF1P30408 202 aa27.05■■□□□ 1.92
CASC4-204ENST00000557945 METTL22Q9BUU2 404 aaPredicted RBP27.05■■□□□ 1.92
CASC4-204ENST00000557945 NUP98P52948 1817 aa27.04■■□□□ 1.92
CASC4-204ENST00000557945 ATP5J2-PTCD1G3V325 749 aa27.04■■□□□ 1.92
CASC4-204ENST00000557945 NEXNQ0ZGT2 675 aa27.04■■□□□ 1.92
CASC4-204ENST00000557945 ATP10DQ9P241 1426 aa27.04■■□□□ 1.92
CASC4-204ENST00000557945 SLC4A10Q6U841 1118 aa27.03■■□□□ 1.92
CASC4-204ENST00000557945 ZNF34Q8IZ26 560 aa27.03■■□□□ 1.92
CASC4-204ENST00000557945 API5Q9BZZ5 524 aaKnown RBP27.03■■□□□ 1.92
CASC4-204ENST00000557945 PARP3Q9Y6F1 533 aa27.03■■□□□ 1.92
CASC4-204ENST00000557945 ARFGEF2Q9Y6D5 1785 aa27.03■■□□□ 1.92
CASC4-204ENST00000557945 FAM177BA6PVY3 158 aa27.02■■□□□ 1.92
CASC4-204ENST00000557945 DDR1Q08345 913 aa27.02■■□□□ 1.92
CASC4-204ENST00000557945 ARHGAP45Q92619 1136 aa27.01■■□□□ 1.91
CASC4-204ENST00000557945 CARMIL3Q8ND23 1372 aa27.01■■□□□ 1.91
CASC4-204ENST00000557945 POLRMTO00411 1230 aaKnown RBP27■■□□□ 1.91
CASC4-204ENST00000557945 ZKSCAN2Q63HK3 967 aa27■■□□□ 1.91
CASC4-204ENST00000557945 ISCA1Q9BUE6 129 aa27■■□□□ 1.91
CASC4-204ENST00000557945 PTGER2P43116 358 aa26.99■■□□□ 1.91
CASC4-204ENST00000557945 PARP10Q53GL7 1025 aa26.99■■□□□ 1.91
CASC4-204ENST00000557945 ATF7IPQ6VMQ6 1270 aa26.99■■□□□ 1.91
CASC4-204ENST00000557945 UBN2Q6ZU65 1347 aa26.99■■□□□ 1.91
CASC4-204ENST00000557945 NPHP1O15259 732 aa26.98■■□□□ 1.91
CASC4-204ENST00000557945 SERPINB2P05120 415 aa26.98■■□□□ 1.91
CASC4-204ENST00000557945 NLRP10Q86W26 655 aa26.98■■□□□ 1.91
CASC4-204ENST00000557945 NBPF5PQ86XG9 351 aaPredicted RBP26.98■■□□□ 1.91
CASC4-204ENST00000557945 SUSD4Q5VX71 490 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 SGIP1Q9BQI5 828 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 IGKV5-2P06315 115 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 TRIM27P14373 513 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 TRIM28Q13263 835 aaKnown RBP26.97■■□□□ 1.91
CASC4-204ENST00000557945 CWF19L2Q2TBE0 894 aaKnown RBP26.97■■□□□ 1.91
CASC4-204ENST00000557945 PPP1R42Q7Z4L9 355 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 LINS1Q8NG48 757 aa26.97■■□□□ 1.91
CASC4-204ENST00000557945 ANKRD36CQ5JPF3 1778 aa26.96■■□□□ 1.91
CASC4-204ENST00000557945 BEND3Q5T5X7 828 aa26.96■■□□□ 1.91
CASC4-204ENST00000557945 CLUAP1Q96AJ1 413 aa26.96■■□□□ 1.91
CASC4-204ENST00000557945 CWC25Q9NXE8 425 aaPredicted RBP26.96■■□□□ 1.91
CASC4-204ENST00000557945 TNNQ9UQP3 1299 aa26.96■■□□□ 1.91
CASC4-204ENST00000557945 COL24A1Q17RW2 1714 aa26.95■■□□□ 1.9
CASC4-204ENST00000557945 NEURL1BA8MQ27 555 aa26.95■■□□□ 1.9
CASC4-204ENST00000557945 GTF2E1P29083 439 aaPredicted RBP26.95■■□□□ 1.9
CASC4-204ENST00000557945 TPTE2Q6XPS3 522 aa26.95■■□□□ 1.9
CASC4-204ENST00000557945 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.95■■□□□ 1.9
CASC4-204ENST00000557945 CCDC191Q8NCU4 936 aa26.95■■□□□ 1.9
CASC4-204ENST00000557945 UTP14AQ9BVJ6 771 aaKnown RBP26.95■■□□□ 1.9
CASC4-204ENST00000557945 SRCIN1Q9C0H9 1055 aa26.95■■□□□ 1.9
CASC4-204ENST00000557945 NYXQ9GZU5 481 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms