RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
RDH11-209ENST00000557273 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
RDH11-209ENST00000557273 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
RDH11-209ENST00000557273 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
RDH11-209ENST00000557273 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
RDH11-209ENST00000557273 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
RDH11-209ENST00000557273 LAMB4A4D0S4 1761 aa13.57□□□□□ -0.24
RDH11-209ENST00000557273 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
RDH11-209ENST00000557273 KCNQ3O43525 872 aa13.56□□□□□ -0.24
RDH11-209ENST00000557273 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
RDH11-209ENST00000557273 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
RDH11-209ENST00000557273 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
RDH11-209ENST00000557273 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
RDH11-209ENST00000557273 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
RDH11-209ENST00000557273 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
RDH11-209ENST00000557273 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
RDH11-209ENST00000557273 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
RDH11-209ENST00000557273 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
RDH11-209ENST00000557273 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
RDH11-209ENST00000557273 CCDC24Q8N4L8 307 aa13.54□□□□□ -0.24
RDH11-209ENST00000557273 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
RDH11-209ENST00000557273 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
RDH11-209ENST00000557273 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
RDH11-209ENST00000557273 NPHP1O15259 732 aa13.53□□□□□ -0.24
RDH11-209ENST00000557273 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
RDH11-209ENST00000557273 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
RDH11-209ENST00000557273 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
RDH11-209ENST00000557273 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
RDH11-209ENST00000557273 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 IQCA1LA6NCM1 817 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 DDNO94850 711 aaPredicted RBP13.52□□□□□ -0.25
RDH11-209ENST00000557273 NPR1P16066 1061 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 CCDC93Q567U6 631 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
RDH11-209ENST00000557273 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
RDH11-209ENST00000557273 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
RDH11-209ENST00000557273 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
RDH11-209ENST00000557273 NUP98P52948 1817 aa13.51□□□□□ -0.25
RDH11-209ENST00000557273 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
RDH11-209ENST00000557273 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
RDH11-209ENST00000557273 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
RDH11-209ENST00000557273 TNS4Q8IZW8 715 aa13.51□□□□□ -0.25
RDH11-209ENST00000557273 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
RDH11-209ENST00000557273 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
RDH11-209ENST00000557273 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
RDH11-209ENST00000557273 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
RDH11-209ENST00000557273 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
RDH11-209ENST00000557273 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
RDH11-209ENST00000557273 MCM10Q7L590 875 aa13.5□□□□□ -0.25
RDH11-209ENST00000557273 LDHDQ86WU2 507 aa13.5□□□□□ -0.25
RDH11-209ENST00000557273 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
RDH11-209ENST00000557273 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
RDH11-209ENST00000557273 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
RDH11-209ENST00000557273 RTKN2Q8IZC4 609 aa13.49□□□□□ -0.25
RDH11-209ENST00000557273 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
RDH11-209ENST00000557273 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
RDH11-209ENST00000557273 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
RDH11-209ENST00000557273 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
RDH11-209ENST00000557273 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
RDH11-209ENST00000557273 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
RDH11-209ENST00000557273 ALDH1B1P30837 517 aa13.47□□□□□ -0.25
RDH11-209ENST00000557273 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 FZD9O00144 591 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 ITGBL1O95965 494 aaPredicted RBP13.46□□□□□ -0.25
RDH11-209ENST00000557273 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
RDH11-209ENST00000557273 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 HLFQ16534 295 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 PSMD1Q99460 953 aa13.46□□□□□ -0.25
RDH11-209ENST00000557273 ZNF277Q9NRM2 450 aaPredicted RBP13.46□□□□□ -0.25
RDH11-209ENST00000557273 IARSP41252 1262 aaKnown RBP13.45□□□□□ -0.26
RDH11-209ENST00000557273 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
RDH11-209ENST00000557273 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
RDH11-209ENST00000557273 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
RDH11-209ENST00000557273 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
RDH11-209ENST00000557273 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
RDH11-209ENST00000557273 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
RDH11-209ENST00000557273 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
RDH11-209ENST00000557273 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
RDH11-209ENST00000557273 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
RDH11-209ENST00000557273 GPC2Q8N158 579 aa13.44□□□□□ -0.26
RDH11-209ENST00000557273 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 EPHX2P34913 555 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 OLFM4Q6UX06 510 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
RDH11-209ENST00000557273 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
RDH11-209ENST00000557273 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
RDH11-209ENST00000557273 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
RDH11-209ENST00000557273 COL4A5P29400 1685 aa13.42□□□□□ -0.26
RDH11-209ENST00000557273 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
RDH11-209ENST00000557273 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
RDH11-209ENST00000557273 RNF123Q5XPI4 1314 aa13.41□□□□□ -0.26
RDH11-209ENST00000557273 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
RDH11-209ENST00000557273 CAPN15O75808 1086 aa13.41□□□□□ -0.26
RDH11-209ENST00000557273 NEFMP07197 916 aa13.41□□□□□ -0.26
RDH11-209ENST00000557273 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
RDH11-209ENST00000557273 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms