RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 NPHP1O15259 732 aa26.15■■□□□ 1.78
PRKCH-219ENST00000555906 C16orf71Q8IYS4 520 aaPredicted RBP26.15■■□□□ 1.78
PRKCH-219ENST00000555906 ZNF622Q969S3 477 aaKnown RBP eCLIP26.15■■□□□ 1.78
PRKCH-219ENST00000555906 NBPF26B4DH59 902 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 APLP1P51693 650 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 PRELPP51888 382 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 NFE2L2Q16236 605 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 NBPF10Q6P3W6 841 aaKnown RBP26.14■■□□□ 1.78
PRKCH-219ENST00000555906 CCDC24Q8N4L8 307 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 NBPF15Q8N660 670 aa26.14■■□□□ 1.78
PRKCH-219ENST00000555906 PNISRQ8TF01 805 aaKnown RBP26.14■■□□□ 1.78
PRKCH-219ENST00000555906 PNNQ9H307 717 aaKnown RBP26.13■■□□□ 1.77
PRKCH-219ENST00000555906 MAPK8IP3Q9UPT6 1336 aa26.13■■□□□ 1.77
PRKCH-219ENST00000555906 NUP98P52948 1817 aa26.12■■□□□ 1.77
PRKCH-219ENST00000555906 STYK1Q6J9G0 422 aa26.12■■□□□ 1.77
PRKCH-219ENST00000555906 NBPF5PQ86XG9 351 aaPredicted RBP26.11■■□□□ 1.77
PRKCH-219ENST00000555906 SRGNP10124 158 aa26.1■■□□□ 1.77
PRKCH-219ENST00000555906 CNKSR1Q969H4 720 aa26.1■■□□□ 1.77
PRKCH-219ENST00000555906 MIS18AQ9NYP9 233 aa26.1■■□□□ 1.77
PRKCH-219ENST00000555906 LTBP3Q9NS15 1303 aa26.1■■□□□ 1.77
PRKCH-219ENST00000555906 C21orf2O43822 256 aa26.09■■□□□ 1.77
PRKCH-219ENST00000555906 FSTL1Q12841 308 aa26.09■■□□□ 1.77
PRKCH-219ENST00000555906 GLTPD2A6NH11 291 aa26.08■■□□□ 1.77
PRKCH-219ENST00000555906 RALBP1Q15311 655 aa26.08■■□□□ 1.77
PRKCH-219ENST00000555906 MASTLQ96GX5 879 aa26.08■■□□□ 1.77
PRKCH-219ENST00000555906 RRAGCQ9HB90 399 aa26.08■■□□□ 1.77
PRKCH-219ENST00000555906 PRPF40BQ6NWY9 871 aaKnown RBP26.07■■□□□ 1.76
PRKCH-219ENST00000555906 NIP7Q9Y221 180 aaKnown RBP eCLIP26.07■■□□□ 1.76
PRKCH-219ENST00000555906 EIF4A1P60842 406 aaKnown RBP26.06■■□□□ 1.76
PRKCH-219ENST00000555906 SOGA3Q5TF21 947 aa26.06■■□□□ 1.76
PRKCH-219ENST00000555906 THUMPD2Q9BTF0 503 aaKnown RBP26.06■■□□□ 1.76
PRKCH-219ENST00000555906 TAOK3Q9H2K8 898 aa26.05■■□□□ 1.76
PRKCH-219ENST00000555906 ZNF219Q9P2Y4 722 aaPredicted RBP26.05■■□□□ 1.76
PRKCH-219ENST00000555906 KLRG2A4D1S0 409 aaPredicted RBP26.03■■□□□ 1.76
PRKCH-219ENST00000555906 TPTE2Q6XPS3 522 aa26.03■■□□□ 1.76
PRKCH-219ENST00000555906 NPR1P16066 1061 aa26.02■■□□□ 1.76
PRKCH-219ENST00000555906 HLFQ16534 295 aa26.02■■□□□ 1.76
PRKCH-219ENST00000555906 SMC1BQ8NDV3 1235 aa26.02■■□□□ 1.76
PRKCH-219ENST00000555906 IBTKQ9P2D0 1353 aaPredicted RBP26.02■■□□□ 1.76
PRKCH-219ENST00000555906 ERVV-1B6SEH8 477 aa26.01■■□□□ 1.75
PRKCH-219ENST00000555906 VEGFAP15692 232 aaPredicted RBP26.01■■□□□ 1.75
PRKCH-219ENST00000555906 ERBB4Q15303 1308 aa26.01■■□□□ 1.75
PRKCH-219ENST00000555906 MAP3K15Q6ZN16 1313 aa26.01■■□□□ 1.75
PRKCH-219ENST00000555906 RIC1Q4ADV7 1423 aa26■■□□□ 1.75
PRKCH-219ENST00000555906 ERFEQ4G0M1 354 aa26■■□□□ 1.75
PRKCH-219ENST00000555906 ABCC12Q96J65 1359 aa25.99■■□□□ 1.75
PRKCH-219ENST00000555906 MYBBP1AQ9BQG0 1328 aaKnown RBP25.99■■□□□ 1.75
PRKCH-219ENST00000555906 KIF6Q6ZMV9 814 aa25.99■■□□□ 1.75
PRKCH-219ENST00000555906 ANKRD36CQ5JPF3 1778 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 CCDC93Q567U6 631 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 DPY19L2Q6NUT2 758 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 DNAJC5GQ8N7S2 189 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 C7orf43Q8WVR3 580 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 NYXQ9GZU5 481 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 TSPYL4Q9UJ04 414 aa25.98■■□□□ 1.75
PRKCH-219ENST00000555906 LMOD3Q0VAK6 560 aa25.97■■□□□ 1.75
PRKCH-219ENST00000555906 FAM177BA6PVY3 158 aa25.96■■□□□ 1.75
PRKCH-219ENST00000555906 RIPK4P57078 832 aa25.96■■□□□ 1.75
PRKCH-219ENST00000555906 NGEFQ8N5V2 710 aa25.96■■□□□ 1.75
PRKCH-219ENST00000555906 BABAM1Q9NWV8 329 aa25.96■■□□□ 1.75
PRKCH-219ENST00000555906 RRP7AQ9Y3A4 280 aaKnown RBP25.96■■□□□ 1.75
PRKCH-219ENST00000555906 MYL6BP14649 208 aa25.95■■□□□ 1.74
PRKCH-219ENST00000555906 TTLL7Q6ZT98 887 aa25.95■■□□□ 1.74
PRKCH-219ENST00000555906 SCN4AP35499 1836 aa25.95■■□□□ 1.74
PRKCH-219ENST00000555906 GTF2E1P29083 439 aaPredicted RBP25.94■■□□□ 1.74
PRKCH-219ENST00000555906 TMPOP42166 694 aaKnown RBP25.94■■□□□ 1.74
PRKCH-219ENST00000555906 UBN2Q6ZU65 1347 aa25.93■■□□□ 1.74
PRKCH-219ENST00000555906 POTECB2RU33 542 aa25.93■■□□□ 1.74
PRKCH-219ENST00000555906 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
PRKCH-219ENST00000555906 CRY2Q49AN0 593 aa25.93■■□□□ 1.74
PRKCH-219ENST00000555906 SNED1Q8TER0 1413 aa25.93■■□□□ 1.74
PRKCH-219ENST00000555906 FKBP4Q02790 459 aaKnown RBP eCLIP25.92■■□□□ 1.74
PRKCH-219ENST00000555906 ZBTB3Q9H5J0 574 aa25.92■■□□□ 1.74
PRKCH-219ENST00000555906 ALDH1B1P30837 517 aa25.91■■□□□ 1.74
PRKCH-219ENST00000555906 HTRA3P83110 453 aa25.9■■□□□ 1.74
PRKCH-219ENST00000555906 GIGYF2Q6Y7W6 1299 aaKnown RBP25.9■■□□□ 1.74
PRKCH-219ENST00000555906 LRP10Q7Z4F1 713 aa25.9■■□□□ 1.74
PRKCH-219ENST00000555906 NUTM1Q86Y26 1132 aa25.9■■□□□ 1.74
PRKCH-219ENST00000555906 RTKN2Q8IZC4 609 aa25.9■■□□□ 1.74
PRKCH-219ENST00000555906 KLRG1Q96E93 195 aa25.9■■□□□ 1.74
PRKCH-219ENST00000555906 GPTP24298 496 aa25.89■■□□□ 1.74
PRKCH-219ENST00000555906 ZNF34Q8IZ26 560 aa25.88■■□□□ 1.73
PRKCH-219ENST00000555906 LAMB2P55268 1798 aa25.87■■□□□ 1.73
PRKCH-219ENST00000555906 NTSR2O95665 410 aa25.87■■□□□ 1.73
PRKCH-219ENST00000555906 PDIA6Q15084 440 aa25.87■■□□□ 1.73
PRKCH-219ENST00000555906 DDNO94850 711 aaPredicted RBP25.86■■□□□ 1.73
PRKCH-219ENST00000555906 WDR43Q15061 677 aaKnown RBP eCLIP25.86■■□□□ 1.73
PRKCH-219ENST00000555906 SUSD4Q5VX71 490 aa25.86■■□□□ 1.73
PRKCH-219ENST00000555906 OLFM4Q6UX06 510 aa25.86■■□□□ 1.73
PRKCH-219ENST00000555906 CCDC146Q8IYE0 955 aa25.86■■□□□ 1.73
PRKCH-219ENST00000555906 L3MBTL3Q96JM7 780 aaPredicted RBP25.86■■□□□ 1.73
PRKCH-219ENST00000555906 ZNF277Q9NRM2 450 aaPredicted RBP25.86■■□□□ 1.73
PRKCH-219ENST00000555906 EIF2S2P20042 333 aaKnown RBP25.85■■□□□ 1.73
PRKCH-219ENST00000555906 HOXA10P31260 410 aaPredicted RBP25.85■■□□□ 1.73
PRKCH-219ENST00000555906 PARP10Q53GL7 1025 aa25.85■■□□□ 1.73
PRKCH-219ENST00000555906 IFFO2Q5TF58 517 aa25.85■■□□□ 1.73
PRKCH-219ENST00000555906 JMYQ8N9B5 988 aa25.85■■□□□ 1.73
PRKCH-219ENST00000555906 RPGRQ92834 1020 aaKnown RBP25.85■■□□□ 1.73
PRKCH-219ENST00000555906 RUNDC1Q96C34 613 aa25.85■■□□□ 1.73
PRKCH-219ENST00000555906 PCNTO95613 3336 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms