RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
SPTLC2-202ENST00000554365 COL11A2P13942 1736 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-202ENST00000554365 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
SPTLC2-202ENST00000554365 ST5P78524 1137 aa18.58■□□□□ 0.56
SPTLC2-202ENST00000554365 COL13A1Q5TAT6 717 aaPredicted RBP18.58■□□□□ 0.56
SPTLC2-202ENST00000554365 CFAP53Q96M91 514 aa18.58■□□□□ 0.56
SPTLC2-202ENST00000554365 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
SPTLC2-202ENST00000554365 POTECB2RU33 542 aa18.56■□□□□ 0.56
SPTLC2-202ENST00000554365 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
SPTLC2-202ENST00000554365 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
SPTLC2-202ENST00000554365 TAOK3Q9H2K8 898 aa18.56■□□□□ 0.56
SPTLC2-202ENST00000554365 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
SPTLC2-202ENST00000554365 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
SPTLC2-202ENST00000554365 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
SPTLC2-202ENST00000554365 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
SPTLC2-202ENST00000554365 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
SPTLC2-202ENST00000554365 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
SPTLC2-202ENST00000554365 SRGNP10124 158 aa18.54■□□□□ 0.56
SPTLC2-202ENST00000554365 MCM10Q7L590 875 aa18.54■□□□□ 0.56
SPTLC2-202ENST00000554365 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
SPTLC2-202ENST00000554365 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
SPTLC2-202ENST00000554365 U2AF1L5P0DN76 240 aaPredicted RBP18.53■□□□□ 0.56
SPTLC2-202ENST00000554365 U2AF1Q01081 240 aaKnown RBP eCLIP18.53■□□□□ 0.56
SPTLC2-202ENST00000554365 NBPF5PQ86XG9 351 aaPredicted RBP18.53■□□□□ 0.56
SPTLC2-202ENST00000554365 MASTLQ96GX5 879 aa18.53■□□□□ 0.56
SPTLC2-202ENST00000554365 CACNA1SQ13698 1873 aa18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 DDNO94850 711 aaPredicted RBP18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 SOGA3Q5TF21 947 aa18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
SPTLC2-202ENST00000554365 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 HSPA1AP0DMV8 641 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 HSPA1BP0DMV9 641 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 TNS4Q8IZW8 715 aa18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-202ENST00000554365 CAPN15O75808 1086 aa18.5■□□□□ 0.55
SPTLC2-202ENST00000554365 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
SPTLC2-202ENST00000554365 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
SPTLC2-202ENST00000554365 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
SPTLC2-202ENST00000554365 POTEJP0CG39 1038 aa18.49■□□□□ 0.55
SPTLC2-202ENST00000554365 CHADLQ6NUI6 762 aa18.49■□□□□ 0.55
SPTLC2-202ENST00000554365 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
SPTLC2-202ENST00000554365 NPR1P16066 1061 aa18.48■□□□□ 0.55
SPTLC2-202ENST00000554365 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
SPTLC2-202ENST00000554365 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
SPTLC2-202ENST00000554365 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 TPTE2Q6XPS3 522 aa18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 PCNTO95613 3336 aa18.47■□□□□ 0.55
SPTLC2-202ENST00000554365 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
SPTLC2-202ENST00000554365 MKRN1Q9UHC7 482 aaKnown RBP18.46■□□□□ 0.55
SPTLC2-202ENST00000554365 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
SPTLC2-202ENST00000554365 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
SPTLC2-202ENST00000554365 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
SPTLC2-202ENST00000554365 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
SPTLC2-202ENST00000554365 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 FKBP4Q02790 459 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 HLFQ16534 295 aa18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 OLFM4Q6UX06 510 aa18.44■□□□□ 0.54
SPTLC2-202ENST00000554365 KLRG2A4D1S0 409 aaPredicted RBP18.43■□□□□ 0.54
SPTLC2-202ENST00000554365 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
SPTLC2-202ENST00000554365 RGL2O15211 777 aa18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 L3MBTL3Q96JM7 780 aaPredicted RBP18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
SPTLC2-202ENST00000554365 NEFMP07197 916 aa18.41■□□□□ 0.54
SPTLC2-202ENST00000554365 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
SPTLC2-202ENST00000554365 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
SPTLC2-202ENST00000554365 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
SPTLC2-202ENST00000554365 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
SPTLC2-202ENST00000554365 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
SPTLC2-202ENST00000554365 SYNE4Q8N205 404 aa18.39■□□□□ 0.53
SPTLC2-202ENST00000554365 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
SPTLC2-202ENST00000554365 LAMB4A4D0S4 1761 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 SCN4AP35499 1836 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 PASKQ96RG2 1323 aa18.38■□□□□ 0.53
SPTLC2-202ENST00000554365 MYL6BP14649 208 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 EPHX2P34913 555 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
SPTLC2-202ENST00000554365 ERVV-1B6SEH8 477 aa18.36■□□□□ 0.53
SPTLC2-202ENST00000554365 GPTP24298 496 aa18.36■□□□□ 0.53
SPTLC2-202ENST00000554365 MAP3K15Q6ZN16 1313 aa18.36■□□□□ 0.53
SPTLC2-202ENST00000554365 TMEM88BA6NKF7 163 aa18.35■□□□□ 0.53
SPTLC2-202ENST00000554365 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
SPTLC2-202ENST00000554365 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms