RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SNRPA1P09661 255 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NFIXQ14938 502 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A8Q2Y0W8 1093 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC27A3Q5K4L6 730 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 GORABQ5T7V8 394 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 TTLL6Q8N841 843 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IL17REQ8NFR9 667 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 XAGE3Q8WTP9 111 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NLRP3Q96P20 1036 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MYD88Q99836 296 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SIL1Q9H173 461 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC52A2Q9HAB3 445 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PDE4DIPQ5VU43 2346 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 DISP2A7MBM2 1401 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EIF2AK4Q9P2K8 1649 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 UNC13BO14795 1591 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PNPLA7Q6ZV29 1317 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CAMTA1Q9Y6Y1 1673 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 F6X3S4 739 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PPIP5K2O43314 1243 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 YBX3P16989 372 aaKnown RBP eCLIP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 LMOD1P29536 600 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EMP3P54852 163 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 C1QTNF8P60827 252 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC184Q52MB2 194 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 TBC1D9BQ66K14 1250 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MAP1SQ66K74 1059 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 DDX46Q7L014 1031 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 UBE2Q2Q8WVN8 375 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MPHOSPH8Q99549 860 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 ZBTB47Q9UFB7 747 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CPSF1Q10570 1443 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EDC4Q6P2E9 1401 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MROH2AA6NES4 1674 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 ATP7BP35670 1465 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NRXN1Q9ULB1 1477 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IQGAP3Q86VI3 1631 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IRX6P78412 446 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 PRAMEF18Q5VWM3 479 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 DBNDD1Q9H9R9 158 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 FOXD4L1Q9NU39 408 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ATRNO75882 1429 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 RNF123Q5XPI4 1314 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ANKARQ7Z5J8 1434 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ONECUT3O60422 494 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 RPS6KA4O75676 772 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 HMGB1P09429 215 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 HLFQ16534 295 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 STK11IPQ8N1F8 1099 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 VEZTQ9HBM0 779 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 CHPF2Q9P2E5 772 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 SETBP1Q9Y6X0 1596 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 GYS1P13807 737 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 IL13P35225 146 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 EIF6P56537 245 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 DUSP27Q5VZP5 1158 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 UBE3BQ7Z3V4 1068 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 SLC16A10Q8TF71 515 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ZC3H12CQ9C0D7 883 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 CNNM1Q9NRU3 951 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 COL5A2P05997 1499 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 MYOM2P54296 1465 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 USP19O94966 1318 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ZC3H13Q5T200 1668 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 A0A087WZG4 1122 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 POTEB3A0JP26 581 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SNAP23O00161 211 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 POTEBQ6S5H4 581 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DPP8Q6V1X1 898 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ZSCAN29Q8IWY8 852 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 NEUROD6Q96NK8 337 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TAOK3Q9H2K8 898 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PHAXQ9H814 394 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PXDNQ92626 1479 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TULP4Q9NRJ4 1543 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TRIOBPQ9H2D6 2365 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DDX58O95786 925 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TMPOP42166 694 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 LMOD3Q0VAK6 560 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PROSER3Q2NL68 480 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CWF19L2Q2TBE0 894 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TBC1D10BQ4KMP7 808 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 FTSJ3Q8IY81 847 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A9Q96Q91 983 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SMC4Q9NTJ3 1288 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 MTMR7Q9Y216 660 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 INSRP06213 1382 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CDK12Q9NYV4 1490 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CLSPNQ9HAW4 1339 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DEPDC5O75140 1603 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PI4KAP2A4QPH2 592 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC85CA6NKD9 419 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 PDE6BP35913 854 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 FMR1Q06787 632 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRPF39-205ENST00000554081 NFE2L2Q16236 605 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC27Q2M243 656 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 WDR78Q5VTH9 848 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 PRPF40BQ6NWY9 871 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms