RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 STARD3NLO95772 234 aa15.01□□□□□ -0.01
TMEM116-218ENST00000552839 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
TMEM116-218ENST00000552839 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
TMEM116-218ENST00000552839 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
TMEM116-218ENST00000552839 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
TMEM116-218ENST00000552839 ZNF496Q96IT1 587 aaPredicted RBP15□□□□□ -0.01
TMEM116-218ENST00000552839 TAOK3Q9H2K8 898 aa15□□□□□ -0.01
TMEM116-218ENST00000552839 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
TMEM116-218ENST00000552839 SCN4AP35499 1836 aa14.99□□□□□ -0.01
TMEM116-218ENST00000552839 FOXN1O15353 648 aa14.99□□□□□ -0.01
TMEM116-218ENST00000552839 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
TMEM116-218ENST00000552839 HEG1Q9ULI3 1381 aa14.98□□□□□ -0.01
TMEM116-218ENST00000552839 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
TMEM116-218ENST00000552839 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
TMEM116-218ENST00000552839 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
TMEM116-218ENST00000552839 SRGNP10124 158 aa14.97□□□□□ -0.01
TMEM116-218ENST00000552839 IL6STP40189 918 aaPredicted RBP14.97□□□□□ -0.01
TMEM116-218ENST00000552839 STYK1Q6J9G0 422 aa14.97□□□□□ -0.01
TMEM116-218ENST00000552839 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
TMEM116-218ENST00000552839 ZNF790Q6PG37 636 aa14.97□□□□□ -0.01
TMEM116-218ENST00000552839 CNKSR1Q969H4 720 aa14.97□□□□□ -0.01
TMEM116-218ENST00000552839 TEX13AQ9BXU3 409 aaPredicted RBP14.97□□□□□ -0.01
TMEM116-218ENST00000552839 PASKQ96RG2 1323 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 CAMTA2O94983 1202 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 A1BGP04217 495 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 CNBD1Q8NA66 436 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 SETDB2Q96T68 719 aa14.96□□□□□ -0.01
TMEM116-218ENST00000552839 NPHP1O15259 732 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 TEFQ10587 303 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 CCDC184Q52MB2 194 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 LDHDQ86WU2 507 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
TMEM116-218ENST00000552839 TAF1DQ9H5J8 278 aaPredicted RBP14.95□□□□□ -0.02
TMEM116-218ENST00000552839 PRDM10Q9NQV6 1147 aa14.95□□□□□ -0.02
TMEM116-218ENST00000552839 IQCA1LA6NCM1 817 aa14.94□□□□□ -0.02
TMEM116-218ENST00000552839 ST5P78524 1137 aa14.94□□□□□ -0.02
TMEM116-218ENST00000552839 SOGA3Q5TF21 947 aa14.94□□□□□ -0.02
TMEM116-218ENST00000552839 C7orf43Q8WVR3 580 aa14.94□□□□□ -0.02
TMEM116-218ENST00000552839 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
TMEM116-218ENST00000552839 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
TMEM116-218ENST00000552839 VEGFBP49765 207 aa14.93□□□□□ -0.02
TMEM116-218ENST00000552839 ADAMTSL1Q8N6G6 1762 aa14.93□□□□□ -0.02
TMEM116-218ENST00000552839 TMEM88BA6NKF7 163 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 KCNQ3O43525 872 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 CTCFP49711 727 aaPredicted RBP14.92□□□□□ -0.02
TMEM116-218ENST00000552839 DZIP3Q86Y13 1208 aaKnown RBP14.92□□□□□ -0.02
TMEM116-218ENST00000552839 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 ADAMTS8Q9UP79 889 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
TMEM116-218ENST00000552839 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
TMEM116-218ENST00000552839 CCDC93Q567U6 631 aa14.91□□□□□ -0.02
TMEM116-218ENST00000552839 EAPPQ56P03 285 aaPredicted RBP14.91□□□□□ -0.02
TMEM116-218ENST00000552839 NPM2Q86SE8 214 aaKnown RBP14.91□□□□□ -0.02
TMEM116-218ENST00000552839 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
TMEM116-218ENST00000552839 RUNDC1Q96C34 613 aa14.91□□□□□ -0.02
TMEM116-218ENST00000552839 WBP1LQ9NX94 342 aa14.91□□□□□ -0.02
TMEM116-218ENST00000552839 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
TMEM116-218ENST00000552839 LBX1P52954 281 aa14.9□□□□□ -0.02
TMEM116-218ENST00000552839 PNISRQ8TF01 805 aaKnown RBP14.9□□□□□ -0.02
TMEM116-218ENST00000552839 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
TMEM116-218ENST00000552839 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
TMEM116-218ENST00000552839 NPR1P16066 1061 aa14.89□□□□□ -0.03
TMEM116-218ENST00000552839 FKBP4Q02790 459 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMEM116-218ENST00000552839 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
TMEM116-218ENST00000552839 NBPF5PQ86XG9 351 aaPredicted RBP14.89□□□□□ -0.03
TMEM116-218ENST00000552839 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
TMEM116-218ENST00000552839 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
TMEM116-218ENST00000552839 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
TMEM116-218ENST00000552839 KLRG2A4D1S0 409 aaPredicted RBP14.88□□□□□ -0.03
TMEM116-218ENST00000552839 BTBD11A6QL63 1104 aa14.88□□□□□ -0.03
TMEM116-218ENST00000552839 EPHX2P34913 555 aa14.88□□□□□ -0.03
TMEM116-218ENST00000552839 CLEC4GQ6UXB4 293 aa14.88□□□□□ -0.03
TMEM116-218ENST00000552839 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
TMEM116-218ENST00000552839 RASSF10A6NK89 507 aa14.87□□□□□ -0.03
TMEM116-218ENST00000552839 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
TMEM116-218ENST00000552839 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
TMEM116-218ENST00000552839 DEFB115Q30KQ5 88 aa14.87□□□□□ -0.03
TMEM116-218ENST00000552839 RNF123Q5XPI4 1314 aa14.87□□□□□ -0.03
TMEM116-218ENST00000552839 FZD9O00144 591 aa14.86□□□□□ -0.03
TMEM116-218ENST00000552839 MAP1SQ66K74 1059 aaPredicted RBP14.86□□□□□ -0.03
TMEM116-218ENST00000552839 CNTROBQ8N137 903 aa14.86□□□□□ -0.03
TMEM116-218ENST00000552839 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
TMEM116-218ENST00000552839 NFE2L2Q16236 605 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 TPTE2Q6XPS3 522 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 PNMA8AQ86V59 439 aaPredicted RBP14.85□□□□□ -0.03
TMEM116-218ENST00000552839 RTKN2Q8IZC4 609 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 SYNE4Q8N205 404 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 PHACTR3Q96KR7 559 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 ZNF652Q9Y2D9 606 aa14.85□□□□□ -0.03
TMEM116-218ENST00000552839 FAM177BA6PVY3 158 aa14.84□□□□□ -0.03
TMEM116-218ENST00000552839 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
TMEM116-218ENST00000552839 ABHD8Q96I13 439 aa14.84□□□□□ -0.03
TMEM116-218ENST00000552839 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
TMEM116-218ENST00000552839 RRP7AQ9Y3A4 280 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms