RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
SNRPF-203ENST00000551316 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
SNRPF-203ENST00000551316 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
SNRPF-203ENST00000551316 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
SNRPF-203ENST00000551316 SNED1Q8TER0 1413 aa18.95■□□□□ 0.62
SNRPF-203ENST00000551316 MAP2K2P36507 400 aa18.95■□□□□ 0.62
SNRPF-203ENST00000551316 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
SNRPF-203ENST00000551316 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
SNRPF-203ENST00000551316 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
SNRPF-203ENST00000551316 EIF4A2Q14240 407 aaKnown RBP18.94■□□□□ 0.62
SNRPF-203ENST00000551316 ZNF530Q6P9A1 599 aaPredicted RBP18.94■□□□□ 0.62
SNRPF-203ENST00000551316 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
SNRPF-203ENST00000551316 BRIP1Q9BX63 1249 aa18.94■□□□□ 0.62
SNRPF-203ENST00000551316 MRC1P22897 1456 aa18.93■□□□□ 0.62
SNRPF-203ENST00000551316 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
SNRPF-203ENST00000551316 CA12O43570 354 aa18.92■□□□□ 0.62
SNRPF-203ENST00000551316 SAPCD2Q86UD0 394 aa18.92■□□□□ 0.62
SNRPF-203ENST00000551316 HTTP42858 3142 aa18.91■□□□□ 0.62
SNRPF-203ENST00000551316 FZD9O00144 591 aa18.91■□□□□ 0.62
SNRPF-203ENST00000551316 SRGNP10124 158 aa18.91■□□□□ 0.62
SNRPF-203ENST00000551316 PDE6BP35913 854 aa18.91■□□□□ 0.62
SNRPF-203ENST00000551316 EPS15P42566 896 aa18.9■□□□□ 0.62
SNRPF-203ENST00000551316 SCNN1DP51172 638 aa18.9■□□□□ 0.62
SNRPF-203ENST00000551316 SLC51AQ86UW1 340 aa18.9■□□□□ 0.62
SNRPF-203ENST00000551316 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
SNRPF-203ENST00000551316 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.61
SNRPF-203ENST00000551316 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNRPF-203ENST00000551316 STYK1Q6J9G0 422 aa18.89■□□□□ 0.61
SNRPF-203ENST00000551316 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
SNRPF-203ENST00000551316 BRCA2P51587 3418 aa18.88■□□□□ 0.61
SNRPF-203ENST00000551316 SLC39A6Q13433 755 aa18.88■□□□□ 0.61
SNRPF-203ENST00000551316 CCDC93Q567U6 631 aa18.88■□□□□ 0.61
SNRPF-203ENST00000551316 CNKSR1Q969H4 720 aa18.88■□□□□ 0.61
SNRPF-203ENST00000551316 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
SNRPF-203ENST00000551316 MTHFSP49914 203 aa18.87■□□□□ 0.61
SNRPF-203ENST00000551316 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
SNRPF-203ENST00000551316 GPC2Q8N158 579 aa18.87■□□□□ 0.61
SNRPF-203ENST00000551316 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
SNRPF-203ENST00000551316 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
SNRPF-203ENST00000551316 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNRPF-203ENST00000551316 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
SNRPF-203ENST00000551316 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
SNRPF-203ENST00000551316 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
SNRPF-203ENST00000551316 GJA3Q9Y6H8 435 aa18.85■□□□□ 0.61
SNRPF-203ENST00000551316 CENPFP49454 3210 aa18.84■□□□□ 0.61
SNRPF-203ENST00000551316 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
SNRPF-203ENST00000551316 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
SNRPF-203ENST00000551316 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
SNRPF-203ENST00000551316 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
SNRPF-203ENST00000551316 CNBD1Q8NA66 436 aa18.83■□□□□ 0.6
SNRPF-203ENST00000551316 GLIS2Q9BZE0 524 aaPredicted RBP18.83■□□□□ 0.6
SNRPF-203ENST00000551316 A0A0C4DFX4 3053 aa18.82■□□□□ 0.6
SNRPF-203ENST00000551316 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
SNRPF-203ENST00000551316 DLK2Q6UY11 383 aa18.82■□□□□ 0.6
SNRPF-203ENST00000551316 HPS5Q9UPZ3 1129 aa18.82■□□□□ 0.6
SNRPF-203ENST00000551316 CUL9Q8IWT3 2517 aa18.82■□□□□ 0.6
SNRPF-203ENST00000551316 COL6A3P12111 3177 aa18.81■□□□□ 0.6
SNRPF-203ENST00000551316 SYNE4Q8N205 404 aa18.8■□□□□ 0.6
SNRPF-203ENST00000551316 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
SNRPF-203ENST00000551316 TBC1D2BQ9UPU7 963 aa18.8■□□□□ 0.6
SNRPF-203ENST00000551316 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
SNRPF-203ENST00000551316 HHIPL1Q96JK4 782 aa18.79■□□□□ 0.6
SNRPF-203ENST00000551316 ZNF408Q9H9D4 720 aa18.79■□□□□ 0.6
SNRPF-203ENST00000551316 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
SNRPF-203ENST00000551316 FAM155AB1AL88 458 aaPredicted RBP18.78■□□□□ 0.6
SNRPF-203ENST00000551316 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
SNRPF-203ENST00000551316 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
SNRPF-203ENST00000551316 PAPPA2Q9BXP8 1791 aa18.78■□□□□ 0.6
SNRPF-203ENST00000551316 LMOD1P29536 600 aaPredicted RBP18.77■□□□□ 0.6
SNRPF-203ENST00000551316 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
SNRPF-203ENST00000551316 USP50Q70EL3 339 aaPredicted RBP18.76■□□□□ 0.59
SNRPF-203ENST00000551316 CTU1Q7Z7A3 348 aaKnown RBP18.76■□□□□ 0.59
SNRPF-203ENST00000551316 POLR2AP24928 1970 aaKnown RBP18.75■□□□□ 0.59
SNRPF-203ENST00000551316 TRIOBPQ9H2D6 2365 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
SNRPF-203ENST00000551316 ST5P78524 1137 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 NOGQ13253 232 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 AMOTQ4VCS5 1084 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 RNF186Q9NXI6 227 aa18.75■□□□□ 0.59
SNRPF-203ENST00000551316 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
SNRPF-203ENST00000551316 RBBP6Q7Z6E9 1792 aaKnown RBP18.75■□□□□ 0.59
SNRPF-203ENST00000551316 TRPA1O75762 1119 aa18.74■□□□□ 0.59
SNRPF-203ENST00000551316 NPR1P16066 1061 aa18.73■□□□□ 0.59
SNRPF-203ENST00000551316 SAGE1Q9NXZ1 904 aa18.73■□□□□ 0.59
SNRPF-203ENST00000551316 RANBP2P49792 3224 aaKnown RBP18.72■□□□□ 0.59
SNRPF-203ENST00000551316 DLL1O00548 723 aa18.72■□□□□ 0.59
SNRPF-203ENST00000551316 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
SNRPF-203ENST00000551316 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-203ENST00000551316 NPHP1O15259 732 aa18.71■□□□□ 0.59
SNRPF-203ENST00000551316 HIRAP54198 1017 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-203ENST00000551316 HUNKP57058 714 aa18.71■□□□□ 0.59
SNRPF-203ENST00000551316 KIF23Q02241 960 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-203ENST00000551316 RTKN2Q8IZC4 609 aa18.71■□□□□ 0.59
SNRPF-203ENST00000551316 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
SNRPF-203ENST00000551316 SHTN1A0MZ66 631 aa18.7■□□□□ 0.58
SNRPF-203ENST00000551316 TRPM4Q8TD43 1214 aa18.7■□□□□ 0.58
SNRPF-203ENST00000551316 JDP2Q8WYK2 163 aa18.7■□□□□ 0.58
SNRPF-203ENST00000551316 PSMD1Q99460 953 aa18.7■□□□□ 0.58
SNRPF-203ENST00000551316 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms