RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ARXQ96QS3 562 aa16.75■□□□□ 0.27
RAB5C-206ENST00000550406 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
RAB5C-206ENST00000550406 ANKRD36CQ5JPF3 1778 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 MAP3K15Q6ZN16 1313 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 FKBP8Q14318 412 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
RAB5C-206ENST00000550406 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
RAB5C-206ENST00000550406 ZPR1O75312 459 aa16.73■□□□□ 0.27
RAB5C-206ENST00000550406 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
RAB5C-206ENST00000550406 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
RAB5C-206ENST00000550406 BCAR3O75815 825 aa16.72■□□□□ 0.27
RAB5C-206ENST00000550406 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
RAB5C-206ENST00000550406 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
RAB5C-206ENST00000550406 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
RAB5C-206ENST00000550406 TM4SF1P30408 202 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
RAB5C-206ENST00000550406 FLIIQ13045 1269 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
RAB5C-206ENST00000550406 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 ADCY9O60503 1353 aa16.71■□□□□ 0.27
RAB5C-206ENST00000550406 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
RAB5C-206ENST00000550406 GIGYF2Q6Y7W6 1299 aaKnown RBP16.7■□□□□ 0.26
RAB5C-206ENST00000550406 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
RAB5C-206ENST00000550406 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
RAB5C-206ENST00000550406 RGL2O15211 777 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 PTGER2P43116 358 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 NFIXQ14938 502 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 KSR2Q6VAB6 950 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
RAB5C-206ENST00000550406 NRXN2Q9P2S2 1712 aa16.68■□□□□ 0.26
RAB5C-206ENST00000550406 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
RAB5C-206ENST00000550406 DDR1Q08345 913 aa16.68■□□□□ 0.26
RAB5C-206ENST00000550406 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
RAB5C-206ENST00000550406 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
RAB5C-206ENST00000550406 F6X3S4 739 aa16.67■□□□□ 0.26
RAB5C-206ENST00000550406 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
RAB5C-206ENST00000550406 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
RAB5C-206ENST00000550406 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
RAB5C-206ENST00000550406 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
RAB5C-206ENST00000550406 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
RAB5C-206ENST00000550406 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
RAB5C-206ENST00000550406 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
RAB5C-206ENST00000550406 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
RAB5C-206ENST00000550406 METTL22Q9BUU2 404 aaPredicted RBP16.66■□□□□ 0.26
RAB5C-206ENST00000550406 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
RAB5C-206ENST00000550406 RCAN3Q9UKA8 241 aa16.66■□□□□ 0.26
RAB5C-206ENST00000550406 UBN2Q6ZU65 1347 aa16.66■□□□□ 0.26
RAB5C-206ENST00000550406 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
RAB5C-206ENST00000550406 POLRMTO00411 1230 aaKnown RBP16.65■□□□□ 0.26
RAB5C-206ENST00000550406 MMP10P09238 476 aa16.65■□□□□ 0.26
RAB5C-206ENST00000550406 GPTP24298 496 aa16.65■□□□□ 0.26
RAB5C-206ENST00000550406 SPON1Q9HCB6 807 aa16.65■□□□□ 0.26
RAB5C-206ENST00000550406 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
RAB5C-206ENST00000550406 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
RAB5C-206ENST00000550406 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
RAB5C-206ENST00000550406 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
RAB5C-206ENST00000550406 MYD88Q99836 296 aa16.64■□□□□ 0.25
RAB5C-206ENST00000550406 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB5C-206ENST00000550406 PTPRCP08575 1304 aa16.64■□□□□ 0.25
RAB5C-206ENST00000550406 IGKV5-2P06315 115 aa16.63■□□□□ 0.25
RAB5C-206ENST00000550406 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
RAB5C-206ENST00000550406 LRP5O75197 1615 aa16.63■□□□□ 0.25
RAB5C-206ENST00000550406 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
RAB5C-206ENST00000550406 KIF13BQ9NQT8 1826 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 SERPINB2P05120 415 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
RAB5C-206ENST00000550406 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 NLRP10Q86W26 655 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
RAB5C-206ENST00000550406 CWF19L2Q2TBE0 894 aaKnown RBP16.61■□□□□ 0.25
RAB5C-206ENST00000550406 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
RAB5C-206ENST00000550406 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
RAB5C-206ENST00000550406 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
RAB5C-206ENST00000550406 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
RAB5C-206ENST00000550406 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
RAB5C-206ENST00000550406 TRIM27P14373 513 aa16.6■□□□□ 0.25
RAB5C-206ENST00000550406 POLD1P28340 1107 aa16.6■□□□□ 0.25
RAB5C-206ENST00000550406 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
RAB5C-206ENST00000550406 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
RAB5C-206ENST00000550406 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 NTSR2O95665 410 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 LAMB2P55268 1798 aa16.59■□□□□ 0.25
RAB5C-206ENST00000550406 PLIN1O60240 522 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 LINS1Q8NG48 757 aa16.58■□□□□ 0.24
RAB5C-206ENST00000550406 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms