RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
LDHA-223ENST00000545215 USP47Q96K76 1375 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 AOC2O75106 756 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 PTGDRQ13258 359 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 ARHGEF25Q86VW2 580 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 TIAM2Q8IVF5 1701 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
LDHA-223ENST00000545215 C14orf93Q9H972 538 aaKnown RBP9.98□□□□□ -0.81
LDHA-223ENST00000545215 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
LDHA-223ENST00000545215 RGPD5Q99666 1765 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 UBR3Q6ZT12 1888 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
LDHA-223ENST00000545215 TBC1D12O60347 775 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 EVI5O60447 810 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 GRM1Q13255 1194 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 SLIT3O75094 1523 aa9.97□□□□□ -0.81
LDHA-223ENST00000545215 C4BP0C0L5 1744 aa9.96□□□□□ -0.81
LDHA-223ENST00000545215 HAX1O00165 279 aa9.96□□□□□ -0.82
LDHA-223ENST00000545215 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
LDHA-223ENST00000545215 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
LDHA-223ENST00000545215 CNTROBQ8N137 903 aa9.95□□□□□ -0.82
LDHA-223ENST00000545215 NLGN1Q8N2Q7 840 aa9.95□□□□□ -0.82
LDHA-223ENST00000545215 TAF1DQ9H5J8 278 aaPredicted RBP9.95□□□□□ -0.82
LDHA-223ENST00000545215 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
LDHA-223ENST00000545215 DDNO94850 711 aaPredicted RBP9.94□□□□□ -0.82
LDHA-223ENST00000545215 COL9A1P20849 921 aa9.93□□□□□ -0.82
LDHA-223ENST00000545215 TTLL12Q14166 644 aaPredicted RBP9.93□□□□□ -0.82
LDHA-223ENST00000545215 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
LDHA-223ENST00000545215 DDX21Q9NR30 783 aaKnown RBP eCLIP9.93□□□□□ -0.82
LDHA-223ENST00000545215 CCDC88AQ3V6T2 1871 aa9.93□□□□□ -0.82
LDHA-223ENST00000545215 DOT1LQ8TEK3 1739 aa9.92□□□□□ -0.82
LDHA-223ENST00000545215 PLA2G5P39877 138 aa9.92□□□□□ -0.82
LDHA-223ENST00000545215 TMF1P82094 1093 aa9.92□□□□□ -0.82
LDHA-223ENST00000545215 CTU1Q7Z7A3 348 aaKnown RBP9.92□□□□□ -0.82
LDHA-223ENST00000545215 NLRP2Q9NX02 1062 aa9.92□□□□□ -0.82
LDHA-223ENST00000545215 ROCK1Q13464 1354 aa9.91□□□□□ -0.82
LDHA-223ENST00000545215 CHRNA5P30532 468 aa9.91□□□□□ -0.82
LDHA-223ENST00000545215 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
LDHA-223ENST00000545215 MAP1SQ66K74 1059 aaPredicted RBP9.91□□□□□ -0.82
LDHA-223ENST00000545215 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
LDHA-223ENST00000545215 PARP3Q9Y6F1 533 aa9.91□□□□□ -0.82
LDHA-223ENST00000545215 C4AP0C0L4 1744 aa9.91□□□□□ -0.82
LDHA-223ENST00000545215 NFKBIEO00221 500 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 FLIIQ13045 1269 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
LDHA-223ENST00000545215 CIAPIN1Q6FI81 312 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 OTUD5Q96G74 571 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 SNX27Q96L92 541 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 ADAMTSL1Q8N6G6 1762 aa9.9□□□□□ -0.82
LDHA-223ENST00000545215 MKI67P46013 3256 aaKnown RBP9.9□□□□□ -0.83
LDHA-223ENST00000545215 SCN4AP35499 1836 aa9.9□□□□□ -0.83
LDHA-223ENST00000545215 MS4A1P11836 297 aa9.89□□□□□ -0.83
LDHA-223ENST00000545215 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
LDHA-223ENST00000545215 REPIN1Q9BWE0 567 aaKnown RBP9.89□□□□□ -0.83
LDHA-223ENST00000545215 NPDC1Q9NQX5 325 aaPredicted RBP9.89□□□□□ -0.83
LDHA-223ENST00000545215 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
LDHA-223ENST00000545215 FAM50AQ14320 339 aaKnown RBP9.88□□□□□ -0.83
LDHA-223ENST00000545215 CST9Q5W186 159 aa9.88□□□□□ -0.83
LDHA-223ENST00000545215 KCNH5Q8NCM2 988 aa9.88□□□□□ -0.83
LDHA-223ENST00000545215 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
LDHA-223ENST00000545215 SEC24BO95487 1268 aa9.87□□□□□ -0.83
LDHA-223ENST00000545215 PKN2Q16513 984 aaKnown RBP9.87□□□□□ -0.83
LDHA-223ENST00000545215 FAM122AQ96E09 287 aa9.87□□□□□ -0.83
LDHA-223ENST00000545215 SAGE1Q9NXZ1 904 aa9.87□□□□□ -0.83
LDHA-223ENST00000545215 TRAK1Q9UPV9 953 aa9.87□□□□□ -0.83
LDHA-223ENST00000545215 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
LDHA-223ENST00000545215 UNC80Q8N2C7 3258 aa9.86□□□□□ -0.83
LDHA-223ENST00000545215 PNMA8AQ86V59 439 aaPredicted RBP9.86□□□□□ -0.83
LDHA-223ENST00000545215 HHIPL1Q96JK4 782 aa9.86□□□□□ -0.83
LDHA-223ENST00000545215 CDK19Q9BWU1 502 aa9.86□□□□□ -0.83
LDHA-223ENST00000545215 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
LDHA-223ENST00000545215 CDHR5Q9HBB8 845 aa9.86□□□□□ -0.83
LDHA-223ENST00000545215 DICER1Q9UPY3 1922 aaKnown RBP9.86□□□□□ -0.83
LDHA-223ENST00000545215 FMR1Q06787 632 aaKnown RBP eCLIP9.85□□□□□ -0.83
LDHA-223ENST00000545215 LINC00116Q8NCU8 138 aa9.85□□□□□ -0.83
LDHA-223ENST00000545215 EPAS1Q99814 870 aa9.85□□□□□ -0.83
LDHA-223ENST00000545215 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
LDHA-223ENST00000545215 GYS1P13807 737 aa9.84□□□□□ -0.83
LDHA-223ENST00000545215 SAPCD2Q86UD0 394 aa9.84□□□□□ -0.83
LDHA-223ENST00000545215 HACL1Q9UJ83 578 aa9.84□□□□□ -0.83
LDHA-223ENST00000545215 EPHX2P34913 555 aa9.83□□□□□ -0.84
LDHA-223ENST00000545215 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
LDHA-223ENST00000545215 TRAPPC3LQ5T215 181 aa9.83□□□□□ -0.84
LDHA-223ENST00000545215 PCMTD1Q96MG8 357 aaPredicted RBP9.83□□□□□ -0.84
LDHA-223ENST00000545215 CLCN1P35523 988 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
LDHA-223ENST00000545215 ZIC5Q96T25 663 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 RAPGEFL1Q9UHV5 662 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 MAP3K7O43318 606 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 GABBR2O75899 941 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 INSRP06213 1382 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 NOGQ13253 232 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 TTLL6Q8N841 843 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 SLC39A7Q92504 469 aa9.82□□□□□ -0.84
LDHA-223ENST00000545215 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms