RNA–Protein interactions for RNA: ENST00000544481.1

UBC-212, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-212ENST00000544481 POTEJP0CG39 1038 aa17.21■□□□□ 0.35
UBC-212ENST00000544481 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
UBC-212ENST00000544481 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
UBC-212ENST00000544481 NPHP1O15259 732 aa17.19■□□□□ 0.34
UBC-212ENST00000544481 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
UBC-212ENST00000544481 SRGNP10124 158 aa17.19■□□□□ 0.34
UBC-212ENST00000544481 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
UBC-212ENST00000544481 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
UBC-212ENST00000544481 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
UBC-212ENST00000544481 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
UBC-212ENST00000544481 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 MIS18AQ9NYP9 233 aa17.18■□□□□ 0.34
UBC-212ENST00000544481 ST5P78524 1137 aa17.17■□□□□ 0.34
UBC-212ENST00000544481 CAPN15O75808 1086 aa17.16■□□□□ 0.34
UBC-212ENST00000544481 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
UBC-212ENST00000544481 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
UBC-212ENST00000544481 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
UBC-212ENST00000544481 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
UBC-212ENST00000544481 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
UBC-212ENST00000544481 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
UBC-212ENST00000544481 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
UBC-212ENST00000544481 HLFQ16534 295 aa17.15■□□□□ 0.34
UBC-212ENST00000544481 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
UBC-212ENST00000544481 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
UBC-212ENST00000544481 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
UBC-212ENST00000544481 LTBP3Q9NS15 1303 aa17.15■□□□□ 0.34
UBC-212ENST00000544481 HSPA1AP0DMV8 641 aaKnown RBP17.14■□□□□ 0.33
UBC-212ENST00000544481 HSPA1BP0DMV9 641 aaKnown RBP17.14■□□□□ 0.33
UBC-212ENST00000544481 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
UBC-212ENST00000544481 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
UBC-212ENST00000544481 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBC-212ENST00000544481 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
UBC-212ENST00000544481 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
UBC-212ENST00000544481 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
UBC-212ENST00000544481 ZNF277Q9NRM2 450 aaPredicted RBP17.12■□□□□ 0.33
UBC-212ENST00000544481 ZNF541Q9H0D2 1346 aa17.12■□□□□ 0.33
UBC-212ENST00000544481 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
UBC-212ENST00000544481 CLEC4GQ6UXB4 293 aa17.11■□□□□ 0.33
UBC-212ENST00000544481 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
UBC-212ENST00000544481 NPR1P16066 1061 aa17.1■□□□□ 0.33
UBC-212ENST00000544481 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
UBC-212ENST00000544481 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
UBC-212ENST00000544481 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
UBC-212ENST00000544481 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
UBC-212ENST00000544481 CCDC93Q567U6 631 aa17.09■□□□□ 0.33
UBC-212ENST00000544481 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
UBC-212ENST00000544481 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
UBC-212ENST00000544481 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
UBC-212ENST00000544481 KDM3BQ7LBC6 1761 aa17.08■□□□□ 0.33
UBC-212ENST00000544481 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
UBC-212ENST00000544481 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
UBC-212ENST00000544481 NUP98P52948 1817 aa17.07■□□□□ 0.32
UBC-212ENST00000544481 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBC-212ENST00000544481 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
UBC-212ENST00000544481 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
UBC-212ENST00000544481 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
UBC-212ENST00000544481 COL4A5P29400 1685 aa17.07■□□□□ 0.32
UBC-212ENST00000544481 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
UBC-212ENST00000544481 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
UBC-212ENST00000544481 SCN4AP35499 1836 aa17.05■□□□□ 0.32
UBC-212ENST00000544481 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
UBC-212ENST00000544481 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
UBC-212ENST00000544481 GPTP24298 496 aa17.05■□□□□ 0.32
UBC-212ENST00000544481 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
UBC-212ENST00000544481 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
UBC-212ENST00000544481 L3MBTL3Q96JM7 780 aaPredicted RBP17.05■□□□□ 0.32
UBC-212ENST00000544481 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 UBN2Q6ZU65 1347 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 MYL6BP14649 208 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
UBC-212ENST00000544481 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
UBC-212ENST00000544481 ADAMTSL1Q8N6G6 1762 aa17.03■□□□□ 0.32
UBC-212ENST00000544481 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
UBC-212ENST00000544481 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
UBC-212ENST00000544481 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
UBC-212ENST00000544481 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
UBC-212ENST00000544481 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
UBC-212ENST00000544481 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
UBC-212ENST00000544481 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
UBC-212ENST00000544481 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
UBC-212ENST00000544481 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
UBC-212ENST00000544481 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 FZD9O00144 591 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 EPHX2P34913 555 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 CRY2Q49AN0 593 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
UBC-212ENST00000544481 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
UBC-212ENST00000544481 FOXN1O15353 648 aa17■□□□□ 0.31
UBC-212ENST00000544481 ALDH1B1P30837 517 aa17■□□□□ 0.31
UBC-212ENST00000544481 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.316e-26■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms