RNA–Protein interactions for RNA: ENST00000544481.1

UBC-212, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-212ENST00000544481 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
UBC-212ENST00000544481 ABCC9O60706 1549 aa29.4■■■□□ 2.3
UBC-212ENST00000544481 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
UBC-212ENST00000544481 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
UBC-212ENST00000544481 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
UBC-212ENST00000544481 NACADO15069 1562 aa27.56■■■□□ 2
UBC-212ENST00000544481 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
UBC-212ENST00000544481 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
UBC-212ENST00000544481 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
UBC-212ENST00000544481 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
UBC-212ENST00000544481 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
UBC-212ENST00000544481 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
UBC-212ENST00000544481 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
UBC-212ENST00000544481 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
UBC-212ENST00000544481 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
UBC-212ENST00000544481 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
UBC-212ENST00000544481 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
UBC-212ENST00000544481 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
UBC-212ENST00000544481 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
UBC-212ENST00000544481 DNAJC5Q9H3Z4 198 aa25.45■■□□□ 1.66
UBC-212ENST00000544481 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
UBC-212ENST00000544481 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
UBC-212ENST00000544481 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
UBC-212ENST00000544481 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
UBC-212ENST00000544481 CUX2O14529 1486 aa25.26■■□□□ 1.63
UBC-212ENST00000544481 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
UBC-212ENST00000544481 NESP48681 1621 aa25.25■■□□□ 1.63
UBC-212ENST00000544481 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
UBC-212ENST00000544481 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
UBC-212ENST00000544481 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
UBC-212ENST00000544481 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
UBC-212ENST00000544481 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
UBC-212ENST00000544481 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
UBC-212ENST00000544481 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
UBC-212ENST00000544481 WIZO95785 1651 aa24.79■■□□□ 1.56
UBC-212ENST00000544481 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
UBC-212ENST00000544481 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
UBC-212ENST00000544481 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
UBC-212ENST00000544481 WDR62O43379 1518 aa24.54■■□□□ 1.52
UBC-212ENST00000544481 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
UBC-212ENST00000544481 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
UBC-212ENST00000544481 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.51
UBC-212ENST00000544481 CFTRP13569 1480 aa24.39■■□□□ 1.5
UBC-212ENST00000544481 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
UBC-212ENST00000544481 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
UBC-212ENST00000544481 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
UBC-212ENST00000544481 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
UBC-212ENST00000544481 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
UBC-212ENST00000544481 OSCARQ8IYS5 282 aa24.11■■□□□ 1.45
UBC-212ENST00000544481 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
UBC-212ENST00000544481 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
UBC-212ENST00000544481 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
UBC-212ENST00000544481 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
UBC-212ENST00000544481 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
UBC-212ENST00000544481 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
UBC-212ENST00000544481 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
UBC-212ENST00000544481 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
UBC-212ENST00000544481 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.48e-18■■■■■ 28.7
UBC-212ENST00000544481 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
UBC-212ENST00000544481 TARBP1Q13395 1621 aaKnown RBP23.79■■□□□ 1.4
UBC-212ENST00000544481 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
UBC-212ENST00000544481 CHD1O14646 1710 aa23.74■■□□□ 1.39
UBC-212ENST00000544481 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
UBC-212ENST00000544481 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
UBC-212ENST00000544481 FBLN2P98095 1184 aa23.66■■□□□ 1.38
UBC-212ENST00000544481 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
UBC-212ENST00000544481 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
UBC-212ENST00000544481 SOGA1O94964 1423 aa23.61■■□□□ 1.37
UBC-212ENST00000544481 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
UBC-212ENST00000544481 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
UBC-212ENST00000544481 CUX1P39880 1505 aa23.56■■□□□ 1.36
UBC-212ENST00000544481 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
UBC-212ENST00000544481 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
UBC-212ENST00000544481 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
UBC-212ENST00000544481 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
UBC-212ENST00000544481 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
UBC-212ENST00000544481 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
UBC-212ENST00000544481 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
UBC-212ENST00000544481 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
UBC-212ENST00000544481 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
UBC-212ENST00000544481 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
UBC-212ENST00000544481 SYNJ2O15056 1496 aa23.32■■□□□ 1.32
UBC-212ENST00000544481 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
UBC-212ENST00000544481 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
UBC-212ENST00000544481 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
UBC-212ENST00000544481 ERCC6L2Q5T890 1561 aa23.16■■□□□ 1.3
UBC-212ENST00000544481 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
UBC-212ENST00000544481 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
UBC-212ENST00000544481 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
UBC-212ENST00000544481 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
UBC-212ENST00000544481 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
UBC-212ENST00000544481 TOP2BQ02880 1626 aa23.09■■□□□ 1.29
UBC-212ENST00000544481 NUP160Q12769 1436 aa23.03■■□□□ 1.28
UBC-212ENST00000544481 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
UBC-212ENST00000544481 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
UBC-212ENST00000544481 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
UBC-212ENST00000544481 PRG4Q92954 1404 aaPredicted RBP22.84■■□□□ 1.25
UBC-212ENST00000544481 JPH4Q96JJ6 628 aa22.81■■□□□ 1.24
UBC-212ENST00000544481 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
UBC-212ENST00000544481 KIF13AQ9H1H9 1805 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms