RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
RAP1B-230ENST00000543697 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
RAP1B-230ENST00000543697 MSH6P52701 1360 aa11.05□□□□□ -0.64
RAP1B-230ENST00000543697 ABCC3O15438 1527 aa11.05□□□□□ -0.64
RAP1B-230ENST00000543697 TRIM32Q13049 653 aa11.05□□□□□ -0.64
RAP1B-230ENST00000543697 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
RAP1B-230ENST00000543697 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
RAP1B-230ENST00000543697 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
RAP1B-230ENST00000543697 ESPNB1AK53 854 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L10C9JJH3 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L21D6R901 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 KCNA6P17658 529 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 MROH1Q8NDA8 1641 aa11.04□□□□□ -0.64
RAP1B-230ENST00000543697 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 NAIPQ13075 1403 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
RAP1B-230ENST00000543697 SH3BP2P78314 561 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 USP4Q13107 963 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 MPNDQ8N594 471 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
RAP1B-230ENST00000543697 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
RAP1B-230ENST00000543697 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
RAP1B-230ENST00000543697 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 UBR1Q8IWV7 1749 aa11.03□□□□□ -0.64
RAP1B-230ENST00000543697 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 RASA1P20936 1047 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 FOXJ1Q92949 421 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
RAP1B-230ENST00000543697 UNC13BO14795 1591 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 NUP155O75694 1391 aa11.02□□□□□ -0.65
RAP1B-230ENST00000543697 ATRNO75882 1429 aa11.01□□□□□ -0.65
RAP1B-230ENST00000543697 SLIT1O75093 1534 aa11.01□□□□□ -0.65
RAP1B-230ENST00000543697 PTK7Q13308 1070 aa11.01□□□□□ -0.65
RAP1B-230ENST00000543697 FAM200AQ8TCP9 573 aa11.01□□□□□ -0.65
RAP1B-230ENST00000543697 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
RAP1B-230ENST00000543697 SETD5Q9C0A6 1442 aa11□□□□□ -0.65
RAP1B-230ENST00000543697 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
RAP1B-230ENST00000543697 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
RAP1B-230ENST00000543697 TXNDC2Q86VQ3 553 aa10.99□□□□□ -0.65
RAP1B-230ENST00000543697 ANKMY2Q8IV38 441 aa10.99□□□□□ -0.65
RAP1B-230ENST00000543697 SIX5Q8N196 739 aa10.99□□□□□ -0.65
RAP1B-230ENST00000543697 TRPC5Q9UL62 973 aaPredicted RBP10.99□□□□□ -0.65
RAP1B-230ENST00000543697 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
RAP1B-230ENST00000543697 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 DEPDC4Q8N2C3 294 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 DNAAF2Q9NVR5 837 aaKnown RBP10.98□□□□□ -0.65
RAP1B-230ENST00000543697 IQGAP3Q86VI3 1631 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 TET3O43151 1660 aa10.98□□□□□ -0.65
RAP1B-230ENST00000543697 MYCP01106 439 aaPredicted RBP10.97□□□□□ -0.65
RAP1B-230ENST00000543697 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
RAP1B-230ENST00000543697 CLP1Q92989 425 aaKnown RBP10.97□□□□□ -0.65
RAP1B-230ENST00000543697 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
RAP1B-230ENST00000543697 ZMIZ1Q9ULJ6 1067 aa10.97□□□□□ -0.65
RAP1B-230ENST00000543697 LMTK2Q8IWU2 1503 aa10.97□□□□□ -0.65
RAP1B-230ENST00000543697 EFCAB6Q5THR3 1501 aa10.96□□□□□ -0.65
RAP1B-230ENST00000543697 R3HDM1Q15032 1099 aaKnown RBP10.96□□□□□ -0.65
RAP1B-230ENST00000543697 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.65
RAP1B-230ENST00000543697 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
RAP1B-230ENST00000543697 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.65
RAP1B-230ENST00000543697 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
RAP1B-230ENST00000543697 USP21Q9UK80 565 aa10.96□□□□□ -0.65
RAP1B-230ENST00000543697 GNEQ9Y223 722 aaKnown RBP10.96□□□□□ -0.65
RAP1B-230ENST00000543697 BRWD3Q6RI45 1802 aa10.95□□□□□ -0.66
RAP1B-230ENST00000543697 RAB3GAP2Q9H2M9 1393 aa10.95□□□□□ -0.66
RAP1B-230ENST00000543697 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
RAP1B-230ENST00000543697 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
RAP1B-230ENST00000543697 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
RAP1B-230ENST00000543697 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 ARHGAP31Q2M1Z3 1444 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 M0R2N6 131 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 GTF2IP78347 998 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 BRINP3Q76B58 766 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 PCDHB11Q9Y5F2 797 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 E9PCH4 1651 aa10.94□□□□□ -0.66
RAP1B-230ENST00000543697 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
RAP1B-230ENST00000543697 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
RAP1B-230ENST00000543697 CCER1Q8TC90 406 aaPredicted RBP10.93□□□□□ -0.66
RAP1B-230ENST00000543697 CHD4Q14839 1912 aa10.92□□□□□ -0.66
RAP1B-230ENST00000543697 ADAMTS2O95450 1211 aa10.92□□□□□ -0.66
RAP1B-230ENST00000543697 SEC13P55735 322 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms