RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SPATA31A3Q5VYP0 1347 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 TROQ12816 1431 aaPredicted RBP3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 KIAA1107Q9UPP5 1409 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 SPDYE5A6NIY4 337 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 DIXDC1Q155Q3 683 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 CABLES1Q8TDN4 633 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 DACH1Q9UI36 760 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 KDM2AQ9Y2K7 1162 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 KIF15Q9NS87 1388 aa3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 INO80Q9ULG1 1556 aaPredicted RBP3.72□□□□□ -1.81
TRAV1-1-201ENST00000542354 COL6A3P12111 3177 aa3.71□□□□□ -1.81
TRAV1-1-201ENST00000542354 SPATA31A1Q5TZJ5 1347 aa3.71□□□□□ -1.81
TRAV1-1-201ENST00000542354 MINK1Q8N4C8 1332 aaPredicted RBP3.71□□□□□ -1.81
TRAV1-1-201ENST00000542354 MEGF6O75095 1541 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 J3QL48 77 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 HOXA2O43364 376 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 CCNYL3P0C7X3 344 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 MS4A1P11836 297 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 SNRPBP14678 240 aaKnown RBP3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 VEGFAP15692 232 aaPredicted RBP3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 VARSP26640 1264 aaKnown RBP3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 HPS1Q92902 700 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 GPCPD1Q9NPB8 672 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 MTUS2Q5JR59 1369 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 ADGRL2O95490 1459 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 PLEKHH2Q8IVE3 1493 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 THSD7AQ9UPZ6 1657 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 RGPD3A6NKT7 1758 aaPredicted RBP3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 RGPD4Q7Z3J3 1758 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 PIEZO1Q92508 2521 aa3.71□□□□□ -1.82
TRAV1-1-201ENST00000542354 SZT2Q5T011 3432 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 TRPM2O94759 1503 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PIK3C2BO00750 1634 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 ABCA3Q99758 1704 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 H3BM21 787 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 RANGAP1P46060 587 aaPredicted RBP3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PTPRNQ16849 979 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 BARGINQ6ZT62 677 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 ARHGAP27Q6ZUM4 889 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 FAM174AQ8TBP5 190 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PLEKHG2Q9H7P9 1386 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 ADAMTS7Q9UKP4 1686 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 TRIOBPQ9H2D6 2365 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PREX2Q70Z35 1606 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 CICQ96RK0 1608 aaPredicted RBP3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PTPN23Q9H3S7 1636 aa3.7□□□□□ -1.82
TRAV1-1-201ENST00000542354 PLCH1Q4KWH8 1693 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 PXDNQ92626 1479 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 C6orf229H3BNL8 230 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 ADH1CP00326 375 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 C9orf131Q5VYM1 1079 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 DESI1Q6ICB0 168 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 SLC52A1Q9NWF4 448 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 USP35Q9P2H5 1018 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 CFDP1Q9UEE9 299 aaPredicted RBP3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 RRBP1Q9P2E9 1410 aaKnown RBP3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 IGSF1Q8N6C5 1336 aa3.69□□□□□ -1.82
TRAV1-1-201ENST00000542354 IRF6O14896 467 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 GPR37O15354 613 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 CA12O43570 354 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 FDX1P10109 184 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 MDM2Q00987 491 aaPredicted RBP3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 PSME1Q06323 249 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 DEFB115Q30KQ5 88 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 KRT28Q7Z3Y7 464 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 RAPGEFL1Q9UHV5 662 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 ADAMTS13Q76LX8 1427 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 PTPRUQ92729 1446 aa3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 WDR33Q9C0J8 1336 aaKnown RBP3.68□□□□□ -1.82
TRAV1-1-201ENST00000542354 KCPQ6ZWJ8 1503 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 TMEM88BA6NKF7 163 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 SPTLC1O15269 473 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 MAN1A2O60476 641 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 GMPRP36959 345 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 EVA1CP58658 441 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 PTF1AQ7RTS3 328 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 ARMC2Q8NEN0 867 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 TFCP2L1Q9NZI6 479 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 OVOS2A0A0G2JMS6 1433 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 OVOS2A0A0J9YW53 1432 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 ARHGAP31Q2M1Z3 1444 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 OVOS2Q6IE36 1432 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 RIMS2Q9UQ26 1411 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 SYNGAP1Q96PV0 1343 aa3.67□□□□□ -1.82
TRAV1-1-201ENST00000542354 CHD8Q9HCK8 2581 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 VSIG8P0DPA2 414 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 GJA5P36382 358 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 SKOR1P84550 965 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 KCNH2Q12809 1159 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 NR5A1Q13285 461 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 NNTQ13423 1086 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 MTMR2Q13614 643 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 ZNF827Q17R98 1081 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 MRPL14Q6P1L8 145 aaKnown RBP3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 TCP11L2Q8N4U5 519 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 UNC93B1Q9H1C4 597 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 STRN4Q9NRL3 753 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 EVA1BQ9NVM1 165 aa3.66□□□□□ -1.82
TRAV1-1-201ENST00000542354 ZFYVE9O95405 1425 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms