RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SCARB1-207ENST00000541661 ST5P78524 1137 aa17.56■□□□□ 0.4
SCARB1-207ENST00000541661 CLEC4GQ6UXB4 293 aa17.56■□□□□ 0.4
SCARB1-207ENST00000541661 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
SCARB1-207ENST00000541661 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
SCARB1-207ENST00000541661 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
SCARB1-207ENST00000541661 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
SCARB1-207ENST00000541661 TAOK3Q9H2K8 898 aa17.55■□□□□ 0.4
SCARB1-207ENST00000541661 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
SCARB1-207ENST00000541661 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
SCARB1-207ENST00000541661 RGL2O15211 777 aa17.53■□□□□ 0.4
SCARB1-207ENST00000541661 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-207ENST00000541661 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
SCARB1-207ENST00000541661 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
SCARB1-207ENST00000541661 NPHP1O15259 732 aa17.52■□□□□ 0.4
SCARB1-207ENST00000541661 SNRPA1P09661 255 aaKnown RBP17.52■□□□□ 0.4
SCARB1-207ENST00000541661 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
SCARB1-207ENST00000541661 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
SCARB1-207ENST00000541661 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
SCARB1-207ENST00000541661 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-207ENST00000541661 HSPA1AP0DMV8 641 aaKnown RBP17.51■□□□□ 0.39
SCARB1-207ENST00000541661 HSPA1BP0DMV9 641 aaKnown RBP17.51■□□□□ 0.39
SCARB1-207ENST00000541661 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-207ENST00000541661 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-207ENST00000541661 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
SCARB1-207ENST00000541661 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
SCARB1-207ENST00000541661 SCN4AP35499 1836 aa17.51■□□□□ 0.39
SCARB1-207ENST00000541661 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
SCARB1-207ENST00000541661 NPR1P16066 1061 aa17.5■□□□□ 0.39
SCARB1-207ENST00000541661 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
SCARB1-207ENST00000541661 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
SCARB1-207ENST00000541661 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
SCARB1-207ENST00000541661 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
SCARB1-207ENST00000541661 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
SCARB1-207ENST00000541661 MCM10Q7L590 875 aa17.49■□□□□ 0.39
SCARB1-207ENST00000541661 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
SCARB1-207ENST00000541661 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-207ENST00000541661 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
SCARB1-207ENST00000541661 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
SCARB1-207ENST00000541661 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-207ENST00000541661 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCARB1-207ENST00000541661 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
SCARB1-207ENST00000541661 IQCA1LA6NCM1 817 aa17.47■□□□□ 0.39
SCARB1-207ENST00000541661 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
SCARB1-207ENST00000541661 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCARB1-207ENST00000541661 NIP7Q9Y221 180 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCARB1-207ENST00000541661 PASKQ96RG2 1323 aa17.46■□□□□ 0.38
SCARB1-207ENST00000541661 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
SCARB1-207ENST00000541661 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-207ENST00000541661 LDHDQ86WU2 507 aa17.45■□□□□ 0.38
SCARB1-207ENST00000541661 RTKN2Q8IZC4 609 aa17.45■□□□□ 0.38
SCARB1-207ENST00000541661 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-207ENST00000541661 LAMB4A4D0S4 1761 aa17.44■□□□□ 0.38
SCARB1-207ENST00000541661 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
SCARB1-207ENST00000541661 HLFQ16534 295 aa17.44■□□□□ 0.38
SCARB1-207ENST00000541661 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-207ENST00000541661 MKRN1Q9UHC7 482 aaKnown RBP17.43■□□□□ 0.38
SCARB1-207ENST00000541661 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
SCARB1-207ENST00000541661 CAPN15O75808 1086 aa17.42■□□□□ 0.38
SCARB1-207ENST00000541661 ITGBL1O95965 494 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-207ENST00000541661 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
SCARB1-207ENST00000541661 NUP98P52948 1817 aa17.42■□□□□ 0.38
SCARB1-207ENST00000541661 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 ERVV-1B6SEH8 477 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 FZD9O00144 591 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 ZNF541Q9H0D2 1346 aa17.41■□□□□ 0.38
SCARB1-207ENST00000541661 FAM177BA6PVY3 158 aa17.4■□□□□ 0.38
SCARB1-207ENST00000541661 IARSP41252 1262 aaKnown RBP17.4■□□□□ 0.38
SCARB1-207ENST00000541661 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
SCARB1-207ENST00000541661 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
SCARB1-207ENST00000541661 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SCARB1-207ENST00000541661 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-207ENST00000541661 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
SCARB1-207ENST00000541661 PSMD1Q99460 953 aa17.39■□□□□ 0.37
SCARB1-207ENST00000541661 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
SCARB1-207ENST00000541661 EPHX2P34913 555 aa17.38■□□□□ 0.37
SCARB1-207ENST00000541661 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
SCARB1-207ENST00000541661 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-207ENST00000541661 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
SCARB1-207ENST00000541661 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-207ENST00000541661 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-207ENST00000541661 GPC2Q8N158 579 aa17.37■□□□□ 0.37
SCARB1-207ENST00000541661 MAP3K15Q6ZN16 1313 aa17.37■□□□□ 0.37
SCARB1-207ENST00000541661 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
SCARB1-207ENST00000541661 IBTKQ9P2D0 1353 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-207ENST00000541661 FOXN1O15353 648 aa17.36■□□□□ 0.37
SCARB1-207ENST00000541661 VEGFBP49765 207 aa17.36■□□□□ 0.37
SCARB1-207ENST00000541661 EIF4A1P60842 406 aaKnown RBP17.36■□□□□ 0.37
SCARB1-207ENST00000541661 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
SCARB1-207ENST00000541661 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
SCARB1-207ENST00000541661 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
SCARB1-207ENST00000541661 NEFMP07197 916 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms