RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 BTAF1O14981 1849 aa15.42■□□□□ 0.06
DDX55-206ENST00000539934 RBM28Q9NW13 759 aaKnown RBP15.41■□□□□ 0.06
DDX55-206ENST00000539934 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
DDX55-206ENST00000539934 HMOX1P09601 288 aa15.41■□□□□ 0.06
DDX55-206ENST00000539934 PRKAR2BP31323 418 aa15.41■□□□□ 0.06
DDX55-206ENST00000539934 IL13P35225 146 aa15.41■□□□□ 0.06
DDX55-206ENST00000539934 PNPLA7Q6ZV29 1317 aa15.41■□□□□ 0.06
DDX55-206ENST00000539934 KDM4AO75164 1064 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
DDX55-206ENST00000539934 MYCBPQ99417 103 aaPredicted RBP15.4■□□□□ 0.06
DDX55-206ENST00000539934 NHSQ6T4R5 1651 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 IL2RBP14784 551 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 POLD1P28340 1107 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
DDX55-206ENST00000539934 PAPPAQ13219 1627 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 DYNC1I1O14576 645 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
DDX55-206ENST00000539934 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.39■□□□□ 0.05
DDX55-206ENST00000539934 ERBB3P21860 1342 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 EP400NLQ6ZTU2 488 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 SGSM3Q96HU1 749 aa15.39■□□□□ 0.05
DDX55-206ENST00000539934 OFD1O75665 1012 aa15.38■□□□□ 0.05
DDX55-206ENST00000539934 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
DDX55-206ENST00000539934 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
DDX55-206ENST00000539934 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 TRIM35Q9UPQ4 493 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 NFAT5O94916 1531 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 TULP2O00295 520 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 CCDC172P0C7W6 258 aa15.37■□□□□ 0.05
DDX55-206ENST00000539934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.37■□□□□ 0.059e-7■■■■■ 144.6
DDX55-206ENST00000539934 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
DDX55-206ENST00000539934 CT47A1Q5JQC4 288 aaPredicted RBP15.36■□□□□ 0.05
DDX55-206ENST00000539934 BCAR3O75815 825 aa15.36■□□□□ 0.05
DDX55-206ENST00000539934 C20orf194Q5TEA3 1177 aa15.36■□□□□ 0.05
DDX55-206ENST00000539934 MTA1Q13330 715 aa15.35■□□□□ 0.05
DDX55-206ENST00000539934 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
DDX55-206ENST00000539934 NRDCO43847 1150 aa15.35■□□□□ 0.05
DDX55-206ENST00000539934 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
DDX55-206ENST00000539934 KCNJ4P48050 445 aa15.34■□□□□ 0.05
DDX55-206ENST00000539934 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
DDX55-206ENST00000539934 PHACTR3Q96KR7 559 aa15.34■□□□□ 0.05
DDX55-206ENST00000539934 NCAPGQ9BPX3 1015 aa15.34■□□□□ 0.05
DDX55-206ENST00000539934 ABCC6O95255 1503 aa15.34■□□□□ 0.05
DDX55-206ENST00000539934 IL16Q14005 1332 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 SETDB1Q15047 1291 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 ANKRD23Q86SG2 305 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.05
DDX55-206ENST00000539934 USP54Q70EL1 1684 aa15.33■□□□□ 0.04
DDX55-206ENST00000539934 MKL1Q969V6 931 aa15.33■□□□□ 0.04
DDX55-206ENST00000539934 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
DDX55-206ENST00000539934 FSD2A1L4K1 749 aa15.32■□□□□ 0.04
DDX55-206ENST00000539934 SMIM5Q71RC9 77 aa15.32■□□□□ 0.04
DDX55-206ENST00000539934 ZNF513Q8N8E2 541 aaPredicted RBP15.32■□□□□ 0.04
DDX55-206ENST00000539934 SLC16A10Q8TF71 515 aa15.32■□□□□ 0.04
DDX55-206ENST00000539934 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
DDX55-206ENST00000539934 FLT4P35916 1363 aa15.32■□□□□ 0.04
DDX55-206ENST00000539934 AMPHP49418 695 aa15.32■□□□□ 0.04
DDX55-206ENST00000539934 COL23A1Q86Y22 540 aaPredicted RBP15.32■□□□□ 0.04
DDX55-206ENST00000539934 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
DDX55-206ENST00000539934 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 XRCC6P12956 609 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX55-206ENST00000539934 SULT6B1Q6IMI4 303 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 LTN1O94822 1766 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 RARSP54136 660 aaKnown RBP15.31■□□□□ 0.04
DDX55-206ENST00000539934 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 BORCS6Q96GS4 357 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 TRIM34Q9BYJ4 488 aa15.31■□□□□ 0.04
DDX55-206ENST00000539934 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
DDX55-206ENST00000539934 ITFG2Q969R8 447 aa15.3■□□□□ 0.04
DDX55-206ENST00000539934 MRVI1Q9Y6F6 885 aa15.3■□□□□ 0.04
DDX55-206ENST00000539934 TSPAN18Q96SJ8 248 aa15.29■□□□□ 0.04
DDX55-206ENST00000539934 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
DDX55-206ENST00000539934 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
DDX55-206ENST00000539934 CT47B1P0C2W7 299 aaPredicted RBP15.29■□□□□ 0.04
DDX55-206ENST00000539934 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
DDX55-206ENST00000539934 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
DDX55-206ENST00000539934 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
DDX55-206ENST00000539934 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
DDX55-206ENST00000539934 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
DDX55-206ENST00000539934 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.04
DDX55-206ENST00000539934 ARMCX6Q7L4S7 300 aa15.27■□□□□ 0.04
DDX55-206ENST00000539934 PDE3AQ14432 1141 aa15.27■□□□□ 0.03
DDX55-206ENST00000539934 USHBP1Q8N6Y0 703 aa15.27■□□□□ 0.03
DDX55-206ENST00000539934 KIF3AQ9Y496 699 aa15.27■□□□□ 0.03
DDX55-206ENST00000539934 KIF24Q5T7B8 1368 aa15.26■□□□□ 0.03
DDX55-206ENST00000539934 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
DDX55-206ENST00000539934 CAPN2P17655 700 aa15.26■□□□□ 0.03
DDX55-206ENST00000539934 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms