RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
PTPN6-212ENST00000539029 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
PTPN6-212ENST00000539029 COL9A1P20849 921 aa13.51□□□□□ -0.25
PTPN6-212ENST00000539029 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
PTPN6-212ENST00000539029 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
PTPN6-212ENST00000539029 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
PTPN6-212ENST00000539029 PAPPA2Q9BXP8 1791 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 CARMIL3Q8ND23 1372 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 SERPINB2P05120 415 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 LMOD1P29536 600 aaPredicted RBP13.5□□□□□ -0.25
PTPN6-212ENST00000539029 NFIXQ14938 502 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
PTPN6-212ENST00000539029 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 SLX4Q8IY92 1834 aa13.5□□□□□ -0.25
PTPN6-212ENST00000539029 CACNA1SQ13698 1873 aa13.49□□□□□ -0.25
PTPN6-212ENST00000539029 H0YGN5 161 aa13.49□□□□□ -0.25
PTPN6-212ENST00000539029 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-212ENST00000539029 USP50Q70EL3 339 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-212ENST00000539029 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
PTPN6-212ENST00000539029 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
PTPN6-212ENST00000539029 ANKRD31Q8N7Z5 1873 aa13.48□□□□□ -0.25
PTPN6-212ENST00000539029 FZD9O00144 591 aa13.48□□□□□ -0.25
PTPN6-212ENST00000539029 ZPR1O75312 459 aa13.48□□□□□ -0.25
PTPN6-212ENST00000539029 AMPHP49418 695 aa13.48□□□□□ -0.25
PTPN6-212ENST00000539029 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
PTPN6-212ENST00000539029 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
PTPN6-212ENST00000539029 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
PTPN6-212ENST00000539029 PLA2G5P39877 138 aa13.47□□□□□ -0.25
PTPN6-212ENST00000539029 HUNKP57058 714 aa13.47□□□□□ -0.25
PTPN6-212ENST00000539029 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
PTPN6-212ENST00000539029 PANK3Q9H999 370 aa13.47□□□□□ -0.25
PTPN6-212ENST00000539029 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
PTPN6-212ENST00000539029 EPS15P42566 896 aa13.46□□□□□ -0.25
PTPN6-212ENST00000539029 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
PTPN6-212ENST00000539029 ARFGEF2Q9Y6D5 1785 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 FYB1O15117 783 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 PDE6BP35913 854 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 RGMBQ6NW40 437 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 ZNF296Q8WUU4 475 aaPredicted RBP13.45□□□□□ -0.26
PTPN6-212ENST00000539029 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 CCDC102AQ96A19 550 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 ZNF277Q9NRM2 450 aaPredicted RBP13.45□□□□□ -0.26
PTPN6-212ENST00000539029 KIF20BQ96Q89 1820 aa13.45□□□□□ -0.26
PTPN6-212ENST00000539029 BRCA2P51587 3418 aa13.44□□□□□ -0.26
PTPN6-212ENST00000539029 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
PTPN6-212ENST00000539029 GLIS2Q9BZE0 524 aaPredicted RBP13.44□□□□□ -0.26
PTPN6-212ENST00000539029 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
PTPN6-212ENST00000539029 SCNN1DP51172 638 aa13.43□□□□□ -0.26
PTPN6-212ENST00000539029 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN6-212ENST00000539029 COG3Q96JB2 828 aa13.43□□□□□ -0.26
PTPN6-212ENST00000539029 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
PTPN6-212ENST00000539029 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
PTPN6-212ENST00000539029 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
PTPN6-212ENST00000539029 EN2P19622 333 aaPredicted RBP13.42□□□□□ -0.26
PTPN6-212ENST00000539029 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
PTPN6-212ENST00000539029 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
PTPN6-212ENST00000539029 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
PTPN6-212ENST00000539029 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
PTPN6-212ENST00000539029 HTTP42858 3142 aa13.42□□□□□ -0.26
PTPN6-212ENST00000539029 VCANP13611 3396 aa13.41□□□□□ -0.26
PTPN6-212ENST00000539029 CACNA1AO00555 2505 aa13.41□□□□□ -0.26
PTPN6-212ENST00000539029 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
PTPN6-212ENST00000539029 GGNBP2Q9H3C7 697 aa13.41□□□□□ -0.26
PTPN6-212ENST00000539029 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
PTPN6-212ENST00000539029 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
PTPN6-212ENST00000539029 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 CENPFP49454 3210 aa13.4□□□□□ -0.26
PTPN6-212ENST00000539029 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
PTPN6-212ENST00000539029 IARSP41252 1262 aaKnown RBP13.39□□□□□ -0.27
PTPN6-212ENST00000539029 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
PTPN6-212ENST00000539029 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
PTPN6-212ENST00000539029 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
PTPN6-212ENST00000539029 C7orf43Q8WVR3 580 aa13.39□□□□□ -0.27
PTPN6-212ENST00000539029 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
PTPN6-212ENST00000539029 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
PTPN6-212ENST00000539029 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
PTPN6-212ENST00000539029 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
PTPN6-212ENST00000539029 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
PTPN6-212ENST00000539029 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
PTPN6-212ENST00000539029 SOX1O00570 391 aaPredicted RBP13.37□□□□□ -0.27
PTPN6-212ENST00000539029 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
PTPN6-212ENST00000539029 INTS5Q6P9B9 1019 aaKnown RBP13.37□□□□□ -0.27
PTPN6-212ENST00000539029 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
PTPN6-212ENST00000539029 PRO3102Q9H379 93 aa13.37□□□□□ -0.27
PTPN6-212ENST00000539029 PGAP2Q9UHJ9 254 aa13.37□□□□□ -0.27
PTPN6-212ENST00000539029 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
PTPN6-212ENST00000539029 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
PTPN6-212ENST00000539029 SLC10A3P09131 477 aa13.36□□□□□ -0.27
PTPN6-212ENST00000539029 FBLN1P23142 703 aa13.36□□□□□ -0.27
PTPN6-212ENST00000539029 CDC37L1Q7L3B6 337 aa13.36□□□□□ -0.27
PTPN6-212ENST00000539029 SNX27Q96L92 541 aa13.36□□□□□ -0.27
PTPN6-212ENST00000539029 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
PTPN6-212ENST00000539029 TTC28Q96AY4 2481 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms