RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 ERVV-1B6SEH8 477 aa28.31■■■□□ 2.12
RHBDL3-204ENST00000538145 VAMP4O75379 141 aa28.31■■■□□ 2.12
RHBDL3-204ENST00000538145 ANXA1P04083 346 aa28.31■■■□□ 2.12
RHBDL3-204ENST00000538145 MMP10P09238 476 aa28.31■■■□□ 2.12
RHBDL3-204ENST00000538145 CDCA7LQ96GN5 454 aa28.31■■■□□ 2.12
RHBDL3-204ENST00000538145 NUP98P52948 1817 aa28.3■■■□□ 2.12
RHBDL3-204ENST00000538145 TTLL7Q6ZT98 887 aa28.3■■■□□ 2.12
RHBDL3-204ENST00000538145 HYPKQ9NX55 129 aa28.3■■■□□ 2.12
RHBDL3-204ENST00000538145 MAP3K15Q6ZN16 1313 aa28.3■■■□□ 2.12
RHBDL3-204ENST00000538145 NFIXQ14938 502 aa28.28■■■□□ 2.12
RHBDL3-204ENST00000538145 ZNF652Q9Y2D9 606 aa28.28■■■□□ 2.12
RHBDL3-204ENST00000538145 NRXN2Q9P2S2 1712 aa28.27■■■□□ 2.12
RHBDL3-204ENST00000538145 DCAF8L1A6NGE4 600 aa28.27■■■□□ 2.12
RHBDL3-204ENST00000538145 KIF6Q6ZMV9 814 aa28.27■■■□□ 2.12
RHBDL3-204ENST00000538145 COPS6Q7L5N1 327 aa28.27■■■□□ 2.12
RHBDL3-204ENST00000538145 ZBED9Q6R2W3 1325 aa28.27■■■□□ 2.12
RHBDL3-204ENST00000538145 DDR1Q08345 913 aa28.26■■■□□ 2.11
RHBDL3-204ENST00000538145 XAGE3Q8WTP9 111 aa28.26■■■□□ 2.11
RHBDL3-204ENST00000538145 UTRNP46939 3433 aa28.26■■■□□ 2.11
RHBDL3-204ENST00000538145 AFDNP55196 1824 aaKnown RBP28.26■■■□□ 2.11
RHBDL3-204ENST00000538145 POLRMTO00411 1230 aaKnown RBP28.25■■■□□ 2.11
RHBDL3-204ENST00000538145 TBC1D9BQ66K14 1250 aa28.25■■■□□ 2.11
RHBDL3-204ENST00000538145 PARP3Q9Y6F1 533 aa28.25■■■□□ 2.11
RHBDL3-204ENST00000538145 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
RHBDL3-204ENST00000538145 HLFQ16534 295 aa28.24■■■□□ 2.11
RHBDL3-204ENST00000538145 ATP10DQ9P241 1426 aa28.23■■■□□ 2.11
RHBDL3-204ENST00000538145 GIGYF2Q6Y7W6 1299 aaKnown RBP28.22■■■□□ 2.11
RHBDL3-204ENST00000538145 STK31Q9BXU1 1019 aa28.22■■■□□ 2.11
RHBDL3-204ENST00000538145 ZBTB3Q9H5J0 574 aa28.21■■■□□ 2.11
RHBDL3-204ENST00000538145 CARMIL3Q8ND23 1372 aa28.21■■■□□ 2.11
RHBDL3-204ENST00000538145 AIMP1Q12904 312 aaKnown RBP28.2■■■□□ 2.11
RHBDL3-204ENST00000538145 PHAXQ9H814 394 aaKnown RBP28.2■■■□□ 2.11
RHBDL3-204ENST00000538145 CD2APQ9Y5K6 639 aa28.2■■■□□ 2.11
RHBDL3-204ENST00000538145 GOLGB1Q14789 3259 aaKnown RBP28.2■■■□□ 2.11
RHBDL3-204ENST00000538145 ANKRD36CQ5JPF3 1778 aa28.2■■■□□ 2.11
RHBDL3-204ENST00000538145 C10orf71Q711Q0 1435 aa28.2■■■□□ 2.1
RHBDL3-204ENST00000538145 PLBD2Q8NHP8 589 aa28.19■■■□□ 2.1
RHBDL3-204ENST00000538145 ZNF428Q96B54 188 aa28.19■■■□□ 2.1
RHBDL3-204ENST00000538145 SETDB2Q96T68 719 aa28.19■■■□□ 2.1
RHBDL3-204ENST00000538145 SERPINB2P05120 415 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 CT47B1P0C2W7 299 aaPredicted RBP28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 ANKRD13DQ6ZTN6 518 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 NLGN2Q8NFZ4 835 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 ARFGEF2Q9Y6D5 1785 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 SLC4A2P04920 1241 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 BICDL1Q6ZP65 573 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
RHBDL3-204ENST00000538145 ZNF34Q8IZ26 560 aa28.17■■■□□ 2.1
RHBDL3-204ENST00000538145 NIP7Q9Y221 180 aaKnown RBP eCLIP28.17■■■□□ 2.1
RHBDL3-204ENST00000538145 TCERG1O14776 1098 aaKnown RBP28.16■■■□□ 2.1
RHBDL3-204ENST00000538145 HSP90AB3PQ58FF7 597 aa28.16■■■□□ 2.1
RHBDL3-204ENST00000538145 KIAA1551Q9HCM1 1747 aa28.14■■■□□ 2.09
RHBDL3-204ENST00000538145 IBTKQ9P2D0 1353 aaPredicted RBP28.13■■■□□ 2.09
RHBDL3-204ENST00000538145 DDX58O95786 925 aaKnown RBP28.13■■■□□ 2.09
RHBDL3-204ENST00000538145 TCIRG1Q13488 830 aa28.13■■■□□ 2.09
RHBDL3-204ENST00000538145 G2E3Q7L622 706 aa28.13■■■□□ 2.09
RHBDL3-204ENST00000538145 UBN2Q6ZU65 1347 aa28.12■■■□□ 2.09
RHBDL3-204ENST00000538145 CHD4Q14839 1912 aa28.11■■■□□ 2.09
RHBDL3-204ENST00000538145 FLIIQ13045 1269 aa28.11■■■□□ 2.09
RHBDL3-204ENST00000538145 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
RHBDL3-204ENST00000538145 PRR5LQ6MZQ0 368 aa28.11■■■□□ 2.09
RHBDL3-204ENST00000538145 YY1P25490 414 aa28.1■■■□□ 2.09
RHBDL3-204ENST00000538145 ALDH1L2Q3SY69 923 aa28.1■■■□□ 2.09
RHBDL3-204ENST00000538145 KSR2Q6VAB6 950 aa28.1■■■□□ 2.09
RHBDL3-204ENST00000538145 RIC3Q7Z5B4 369 aa28.1■■■□□ 2.09
RHBDL3-204ENST00000538145 ANKRD31Q8N7Z5 1873 aa28.1■■■□□ 2.09
RHBDL3-204ENST00000538145 GPTP24298 496 aa28.09■■■□□ 2.09
RHBDL3-204ENST00000538145 TGFB2P61812 414 aa28.09■■■□□ 2.09
RHBDL3-204ENST00000538145 CNBD1Q8NA66 436 aa28.09■■■□□ 2.09
RHBDL3-204ENST00000538145 ISCA1Q9BUE6 129 aa28.09■■■□□ 2.09
RHBDL3-204ENST00000538145 ADCY9O60503 1353 aa28.08■■■□□ 2.09
RHBDL3-204ENST00000538145 TRIM28Q13263 835 aaKnown RBP28.08■■■□□ 2.09
RHBDL3-204ENST00000538145 TPTE2Q6XPS3 522 aa28.08■■■□□ 2.09
RHBDL3-204ENST00000538145 NBPF5PQ86XG9 351 aaPredicted RBP28.08■■■□□ 2.09
RHBDL3-204ENST00000538145 PI4KAP2A4QPH2 592 aa28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 GPR162Q16538 588 aa28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 MRPL50Q8N5N7 158 aaKnown RBP28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 PI4KAP1Q8N8J0 262 aa28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 SSH1Q8WYL5 1049 aa28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 NYXQ9GZU5 481 aa28.07■■■□□ 2.08
RHBDL3-204ENST00000538145 PXDNLA1KZ92 1463 aa28.06■■■□□ 2.08
RHBDL3-204ENST00000538145 SUSD4Q5VX71 490 aa28.06■■■□□ 2.08
RHBDL3-204ENST00000538145 NLRP10Q86W26 655 aa28.06■■■□□ 2.08
RHBDL3-204ENST00000538145 METTL22Q9BUU2 404 aaPredicted RBP28.06■■■□□ 2.08
RHBDL3-204ENST00000538145 BRIP1Q9BX63 1249 aa28.05■■■□□ 2.08
RHBDL3-204ENST00000538145 MAP3K2Q9Y2U5 619 aa28.05■■■□□ 2.08
RHBDL3-204ENST00000538145 N4BP2Q86UW6 1770 aaPredicted RBP28.05■■■□□ 2.08
RHBDL3-204ENST00000538145 RNF123Q5XPI4 1314 aa28.05■■■□□ 2.08
RHBDL3-204ENST00000538145 BRCA1P38398 1863 aaKnown RBP28.05■■■□□ 2.08
RHBDL3-204ENST00000538145 NTSR2O95665 410 aa28.04■■■□□ 2.08
RHBDL3-204ENST00000538145 BRPF1P55201 1214 aaPredicted RBP28.04■■■□□ 2.08
RHBDL3-204ENST00000538145 ST5P78524 1137 aa28.04■■■□□ 2.08
RHBDL3-204ENST00000538145 FKBP5Q13451 457 aaPredicted RBP28.04■■■□□ 2.08
RHBDL3-204ENST00000538145 PPP1R42Q7Z4L9 355 aa28.04■■■□□ 2.08
RHBDL3-204ENST00000538145 RIC1Q4ADV7 1423 aa28.03■■■□□ 2.08
RHBDL3-204ENST00000538145 DLEC1Q9Y238 1755 aa28.03■■■□□ 2.08
RHBDL3-204ENST00000538145 YBX3P16989 372 aaKnown RBP eCLIP28.02■■■□□ 2.08
RHBDL3-204ENST00000538145 PDZRN3Q9UPQ7 1066 aa28.02■■■□□ 2.08
RHBDL3-204ENST00000538145 UTP14AQ9BVJ6 771 aaKnown RBP28.01■■■□□ 2.07
RHBDL3-204ENST00000538145 FAM177BA6PVY3 158 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms