RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TRIM35Q9UPQ4 493 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.03□□□□□ -1.28
CHD4-206ENST00000536999 ATP7BP35670 1465 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 AOX1Q06278 1338 aa7.02□□□□□ -1.28
CHD4-206ENST00000536999 PEAK1Q9H792 1746 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 PARP4Q9UKK3 1724 aaKnown RBP7.02□□□□□ -1.29
CHD4-206ENST00000536999 HTATSF1O43719 755 aaKnown RBP7.02□□□□□ -1.29
CHD4-206ENST00000536999 TUBB4AP04350 444 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 ZNF827Q17R98 1081 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 ANKRD44Q8N8A2 993 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 MYRIPQ8NFW9 859 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 RBM46Q8TBY0 533 aaKnown RBP7.02□□□□□ -1.29
CHD4-206ENST00000536999 IL17RAQ96F46 866 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 LMBRD1Q9NUN5 540 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 TRAK1Q9UPV9 953 aa7.02□□□□□ -1.29
CHD4-206ENST00000536999 RRP7AQ9Y3A4 280 aaKnown RBP7.02□□□□□ -1.29
CHD4-206ENST00000536999 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 ALS2Q96Q42 1657 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 UQCRHLA0A096LP55 91 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 VAMP4O75379 141 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 UQCRHP07919 91 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 CCT4P50991 539 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 MLLT1Q03111 559 aaPredicted RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 MRPL50Q8N5N7 158 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 NGDNQ8NEJ9 315 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 PIBF1Q8WXW3 757 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 KIF2CQ99661 725 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 BCL2L13Q9BXK5 485 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 R3HCC1Q9Y3T6 440 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 KIF3AQ9Y496 699 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 SBF2Q86WG5 1849 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 TRPM3Q9HCF6 1732 aaPredicted RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 IFT172Q9UG01 1749 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 TULP4Q9NRJ4 1543 aa7.01□□□□□ -1.29
CHD4-206ENST00000536999 CPSF1Q10570 1443 aaKnown RBP7.01□□□□□ -1.29
CHD4-206ENST00000536999 SPDYE4A6NLX3 237 aa7□□□□□ -1.29
CHD4-206ENST00000536999 NEMFO60524 1076 aa7□□□□□ -1.29
CHD4-206ENST00000536999 PRPF40AO75400 957 aaKnown RBP7□□□□□ -1.29
CHD4-206ENST00000536999 GNAI3P08754 354 aa7□□□□□ -1.29
CHD4-206ENST00000536999 FSTL1Q12841 308 aa7□□□□□ -1.29
CHD4-206ENST00000536999 CUL4AQ13619 759 aa7□□□□□ -1.29
CHD4-206ENST00000536999 SAFB2Q14151 953 aaKnown RBP eCLIP7□□□□□ -1.29
CHD4-206ENST00000536999 TWISTNBQ3B726 338 aaPredicted RBP7□□□□□ -1.29
CHD4-206ENST00000536999 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
CHD4-206ENST00000536999 CCDC183Q5T5S1 534 aa7□□□□□ -1.29
CHD4-206ENST00000536999 TMEM132EQ6IEE7 984 aa7□□□□□ -1.29
CHD4-206ENST00000536999 GAS2L3Q86XJ1 694 aa7□□□□□ -1.29
CHD4-206ENST00000536999 AEBP1Q8IUX7 1158 aa7□□□□□ -1.29
CHD4-206ENST00000536999 MARCH10Q8NA82 808 aaPredicted RBP7□□□□□ -1.29
CHD4-206ENST00000536999 TMEM87AQ8NBN3 555 aa7□□□□□ -1.29
CHD4-206ENST00000536999 SIRT1Q96EB6 747 aa7□□□□□ -1.29
CHD4-206ENST00000536999 BABAM1Q9NWV8 329 aa7□□□□□ -1.29
CHD4-206ENST00000536999 FAM13BQ9NYF5 915 aa7□□□□□ -1.29
CHD4-206ENST00000536999 ANKARQ7Z5J8 1434 aa7□□□□□ -1.29
CHD4-206ENST00000536999 LRRC37A3O60309 1634 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 SPDYE2BA6NHP3 402 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 KIF2AO00139 706 aaPredicted RBP6.99□□□□□ -1.29
CHD4-206ENST00000536999 NRDCO43847 1150 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 BRD1O95696 1058 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 ZNF853P0CG23 659 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 SPDYE6P0CI01 402 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 PDCP20941 246 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 SSFA2P28290 1259 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 UBE2HP62256 183 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 SPDYE2Q495Y8 402 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 RNF20Q5VTR2 975 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 NUTM2GQ5VZR2 741 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 GAS2L2Q8NHY3 880 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 ZSCAN31Q96LW9 406 aaPredicted RBP6.99□□□□□ -1.29
CHD4-206ENST00000536999 NMRK2Q9NPI5 230 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 TFCP2L1Q9NZI6 479 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 PAXBP1Q9Y5B6 917 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 BCL9O00512 1426 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 CRB1P82279 1406 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 ADGRB1O14514 1584 aa6.99□□□□□ -1.29
CHD4-206ENST00000536999 CRYBG1Q9Y4K1 1723 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 FYB1O15117 783 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 RUFY2Q8WXA3 655 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 TSR2Q969E8 191 aaKnown RBP6.98□□□□□ -1.29
CHD4-206ENST00000536999 SPTLC3Q9NUV7 552 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 ARHGEF28Q8N1W1 1705 aaKnown RBP6.98□□□□□ -1.29
CHD4-206ENST00000536999 ERBB4Q15303 1308 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 PNPLA7Q6ZV29 1317 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 PAPPAQ13219 1627 aa6.98□□□□□ -1.29
CHD4-206ENST00000536999 QRICH2Q9H0J4 1663 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 ZBTB7CA1YPR0 619 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 MX1P20591 662 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 PRIM1P49642 420 aaKnown RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 NOLC1Q14978 699 aaKnown RBP eCLIP6.97□□□□□ -1.29
CHD4-206ENST00000536999 TOM1L2Q6ZVM7 507 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 AKT1S1Q96B36 256 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 CDCA7Q9BWT1 371 aaPredicted RBP6.97□□□□□ -1.29
CHD4-206ENST00000536999 TSPYL1Q9H0U9 437 aa6.97□□□□□ -1.29
CHD4-206ENST00000536999 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms